Protein–RNA interactions for Protein: Q12974

PTP4A2, Protein tyrosine phosphatase type IVA 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2Q12974 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PTP4A2Q12974 AC025048.6-202ENST00000627667 438 ntBASIC3.8□□□□□ -1.8
PTP4A2Q12974 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A2Q12974 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A2Q12974 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
PTP4A2Q12974 AC007823.1-201ENST00000569932 1566 ntBASIC3.8□□□□□ -1.8
PTP4A2Q12974 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTP4A2Q12974 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTP4A2Q12974 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A2Q12974 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A2Q12974 RNU5E-5P-201ENST00000365379 116 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 RNU6-533P-201ENST00000384144 107 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 RPL7P2-201ENST00000427639 268 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL445584.1-201ENST00000431451 330 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 SNRPFP4-201ENST00000456366 242 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 RPS4XP13-201ENST00000483219 789 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC020593.1-201ENST00000507399 299 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC105313.1-201ENST00000509121 353 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 RNU6-798P-201ENST00000516912 103 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 RNU6-1003P-201ENST00000517099 105 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL034351.1-201ENST00000605288 668 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AC068276.1-201ENST00000605793 379 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 Z69908.1-201ENST00000622603 247 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 AL159972.1-201ENST00000625150 448 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 MIR4275-201ENST00000636486 87 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A2Q12974 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTP4A2Q12974 MTND5P33-201ENST00000571250 1450 ntBASIC3.79□□□□□ -1.8
PTP4A2Q12974 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC005832.2-201ENST00000538921 1430 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORD9-201ENST00000362566 104 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORD116-9-201ENST00000384000 95 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 RNU6-432P-201ENST00000384196 109 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORD116-3-201ENST00000384287 95 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORD116-7-201ENST00000384404 95 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORD116-5-201ENST00000384462 95 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 ATP5A1P2-201ENST00000412323 255 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 DBIP2-201ENST00000419076 262 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AL365338.1-201ENST00000422282 858 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 HMGB1P12-201ENST00000438594 598 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 TRIM60P18-201ENST00000441518 828 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 NIPA2P2-201ENST00000496376 1083 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 FCF1P3-201ENST00000496394 590 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 ARL2BPP6-201ENST00000512757 439 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORA31.8-201ENST00000516327 108 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 SNORA70.18-201ENST00000516696 98 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 RNA5SP468-201ENST00000516782 93 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 IGHV3-32-201ENST00000519182 355 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 MIR4425-201ENST00000580572 84 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AL359999.1-201ENST00000604513 294 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AL121772.2-201ENST00000614331 297 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 AL450472.3-201ENST00000615578 367 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PTP4A2Q12974 AC008725.1-201ENST00000605123 2263 ntBASIC3.78□□□□□ -1.8
PTP4A2Q12974 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PTP4A2Q12974 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A2Q12974 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A2Q12974 GABPAP-201ENST00000419271 1356 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PTP4A2Q12974 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PTP4A2Q12974 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.77□□□□□ -1.81
PTP4A2Q12974 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTP4A2Q12974 RNU4-21P-201ENST00000362802 126 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 SNORD116-1-201ENST00000384335 95 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 RNY3P10-201ENST00000384764 102 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
PTP4A2Q12974 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms