Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 AC106901.1-201ENST00000425086 698 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 SNORD108-201ENST00000459332 71 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 HMGN1P28-201ENST00000521340 364 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.59□□□□□ -2.15
TFF3Q07654 AL049838.1-201ENST00000563647 981 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.6-201ENST00000603753 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.11-201ENST00000604059 253 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.10-201ENST00000604330 253 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AC008162.1-201ENST00000604718 254 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.1-201ENST00000604752 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.2-201ENST00000604983 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.5-201ENST00000605253 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.4-201ENST00000605279 254 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.12-201ENST00000605291 253 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.8-201ENST00000605353 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.9-201ENST00000605428 253 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AL670379.7-201ENST00000605823 252 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AC006329.2-201ENST00000611491 394 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.59□□□□□ -2.15
TFF3Q07654 KPNA2P1-201ENST00000458289 1591 ntBASIC1.59□□□□□ -2.16
TFF3Q07654 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
TFF3Q07654 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.58□□□□□ -2.16
TFF3Q07654 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 HMGB3P30-201ENST00000457863 606 ntBASIC1.58□□□□□ -2.16
TFF3Q07654 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.58□□□□□ -2.16
TFF3Q07654 AC117532.1-201ENST00000514638 323 ntBASIC1.58□□□□□ -2.16
TFF3Q07654 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
TFF3Q07654 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 MIR6840-201ENST00000611937 71 ntBASIC1.58□□□□□ -2.16
TFF3Q07654 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TFF3Q07654 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
TFF3Q07654 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TFF3Q07654 Z82209.1-201ENST00000422141 2135 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TFF3Q07654 RPL23AP47-201ENST00000408017 460 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.57□□□□□ -2.16
TFF3Q07654 UBBP3-201ENST00000445497 241 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC098583.1-201ENST00000480875 255 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 RN7SKP31-201ENST00000516354 278 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.57□□□□□ -2.16
TFF3Q07654 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 AC010872.1-201ENST00000624225 675 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.57□□□□□ -2.16
TFF3Q07654 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.57□□□□□ -2.16
TFF3Q07654 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TFF3Q07654 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.56□□□□□ -2.16
TFF3Q07654 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.56□□□□□ -2.16
TFF3Q07654 SNORA31-201ENST00000362607 130 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 RNA5SP489-201ENST00000410986 109 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.56□□□□□ -2.16
TFF3Q07654 RFESDP1-201ENST00000422350 461 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TFF3Q07654 PSMA2P3-201ENST00000429685 675 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 HMGB1P27-201ENST00000431429 603 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.56□□□□□ -2.16
TFF3Q07654 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.56□□□□□ -2.16
TFF3Q07654 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.56□□□□□ -2.16
TFF3Q07654 CDC42P1-201ENST00000456658 548 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AC096571.1-202ENST00000506634 735 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.56□□□□□ -2.16
TFF3Q07654 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.56□□□□□ -2.16
TFF3Q07654 DUXAP4-201ENST00000603046 613 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AL035411.2-201ENST00000604022 421 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AC116447.1-201ENST00000613153 453 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 AL109809.4-201ENST00000603520 2185 ntBASIC1.56□□□□□ -2.16
TFF3Q07654 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
TFF3Q07654 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TFF3Q07654 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.55□□□□□ -2.16
TFF3Q07654 SNORA67.1-201ENST00000364749 141 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 AC048351.1-201ENST00000420064 602 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.55□□□□□ -2.16
TFF3Q07654 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.55□□□□□ -2.16
TFF3Q07654 AC005840.1-201ENST00000498412 377 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 AC108078.2-201ENST00000510750 236 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.55□□□□□ -2.16
TFF3Q07654 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.55□□□□□ -2.16
TFF3Q07654 RNU1-104P-201ENST00000517280 175 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.55□□□□□ -2.16
TFF3Q07654 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.55□□□□□ -2.16
TFF3Q07654 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms