Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN7AQ01118 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCN7AQ01118 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN7AQ01118 RPS26P21-201ENST00000475397 348 ntBASIC2.2□□□□□ -2.06
SCN7AQ01118 AC090453.1-201ENST00000495560 436 ntBASIC2.2□□□□□ -2.06
SCN7AQ01118 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN7AQ01118 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCN7AQ01118 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.2□□□□□ -2.06
SCN7AQ01118 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN7AQ01118 AL109809.4-201ENST00000603520 2185 ntBASIC2.2□□□□□ -2.06
SCN7AQ01118 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
SCN7AQ01118 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN7AQ01118 U3.15-201ENST00000365398 212 ntBASIC2.19□□□□□ -2.06
SCN7AQ01118 Y_RNA.540-201ENST00000384638 111 ntBASIC2.19□□□□□ -2.06
SCN7AQ01118 FABP5P6-201ENST00000510588 409 ntBASIC2.19□□□□□ -2.06
SCN7AQ01118 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN7AQ01118 PTP4A1P6-201ENST00000531034 478 ntBASIC2.19□□□□□ -2.06
SCN7AQ01118 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN7AQ01118 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
SCN7AQ01118 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCN7AQ01118 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN7AQ01118 MIR7-2-201ENST00000384970 110 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 MTND1P23-201ENST00000416931 372 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN7AQ01118 USP9YP10-201ENST00000454868 628 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN7AQ01118 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN7AQ01118 KATNBL1P1-201ENST00000605192 748 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 AC104307.1-201ENST00000616142 196 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 AL589994.2-201ENST00000621124 579 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 MTCO1P6-201ENST00000481192 1384 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 MTND4P1-201ENST00000457501 1466 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN7AQ01118 AP000275.1-201ENST00000411943 390 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 RAB9AP5-201ENST00000437794 597 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 RPS7P5-201ENST00000441482 581 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 RAB9AP2-201ENST00000443911 597 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN7AQ01118 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN7AQ01118 BX248123.2-201ENST00000606318 124 ntBASIC2.18□□□□□ -2.06
SCN7AQ01118 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
SCN7AQ01118 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCN7AQ01118 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SCN7AQ01118 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN7AQ01118 USP9YP15-201ENST00000442391 422 ntBASIC2.17□□□□□ -2.06
SCN7AQ01118 AC005912.1-201ENST00000495392 255 ntBASIC2.17□□□□□ -2.06
SCN7AQ01118 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN7AQ01118 AC067805.1-201ENST00000559344 470 ntBASIC2.17□□□□□ -2.06
SCN7AQ01118 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN7AQ01118 AL049838.1-201ENST00000563647 981 ntBASIC2.17□□□□□ -2.06
SCN7AQ01118 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN7AQ01118 SNORA31-201ENST00000362607 130 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 CCNB2P1-201ENST00000399411 1150 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 RPL17P12-201ENST00000413391 526 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 AC073464.3-201ENST00000422564 712 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN7AQ01118 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN7AQ01118 RNU2-58P-201ENST00000516403 183 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN7AQ01118 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN7AQ01118 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN7AQ01118 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN7AQ01118 AL133393.1-201ENST00000603277 287 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 AC024560.3-201ENST00000608482 349 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN7AQ01118 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCN7AQ01118 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN7AQ01118 Z82209.1-201ENST00000422141 2135 ntBASIC2.16□□□□□ -2.06
SCN7AQ01118 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN7AQ01118 RNA5SP295-201ENST00000362655 121 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 RN7SKP101-201ENST00000411376 320 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.15□□□□□ -2.06
SCN7AQ01118 AL138799.3-201ENST00000438968 350 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.15□□□□□ -2.06
SCN7AQ01118 AC245517.4-201ENST00000448601 281 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.15□□□□□ -2.06
SCN7AQ01118 MTCO1P42-201ENST00000457379 726 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.15□□□□□ -2.06
SCN7AQ01118 AC068781.1-201ENST00000488231 618 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.15□□□□□ -2.06
SCN7AQ01118 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.15□□□□□ -2.06
SCN7AQ01118 MIR4446-201ENST00000578505 67 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 MIR4458-201ENST00000578872 75 ntBASIC2.15□□□□□ -2.06
SCN7AQ01118 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.15□□□□□ -2.06
SCN7AQ01118 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCN7AQ01118 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SCN7AQ01118 AC011978.2-201ENST00000569835 2054 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 RNU4-7P-201ENST00000364758 141 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 AL031659.1-201ENST00000447075 539 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 OR51B8P-201ENST00000449892 769 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 BX322784.1-201ENST00000455793 1077 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 AC023424.2-201ENST00000493479 777 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 MTCYBP17-201ENST00000503579 789 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN7AQ01118 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN7AQ01118 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN7AQ01118 AC010735.1-201ENST00000567305 1026 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 AC103987.3-201ENST00000582071 292 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms