Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PKNOX1P55347 GABRG2-229ENST00000641017 3628 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 RPS15AP38-201ENST00000413110 372 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 MRPL50P2-201ENST00000416821 482 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC019178.2-201ENST00000423595 505 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 USP9YP36-201ENST00000424581 829 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 RPL23AP76-201ENST00000441860 458 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AP001992.1-205ENST00000462248 379 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 RN7SL807P-201ENST00000470923 297 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC023424.2-201ENST00000493479 777 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC090453.1-201ENST00000495560 436 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 MTCYBP17-201ENST00000503579 789 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC008837.2-201ENST00000513076 418 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC005832.3-201ENST00000537929 631 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 MED28P6-201ENST00000558776 231 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AL132657.2-201ENST00000564417 358 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC006504.3-201ENST00000586818 523 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 BNIP3P27-201ENST00000599991 412 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC008962.1-201ENST00000605729 304 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.84□□□□□ -1.95
PKNOX1P55347 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 AC006111.3-201ENST00000622137 383 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 AC026422.1-201ENST00000623961 452 ntBASIC2.84□□□□□ -1.95
PKNOX1P55347 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
PKNOX1P55347 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
PKNOX1P55347 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PKNOX1P55347 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKNOX1P55347 MIR135A2-201ENST00000384854 100 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 MIR7-3-201ENST00000384898 110 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AL136372.1-201ENST00000403060 228 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 RNA5SP80-201ENST00000410475 111 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 SSXP9-201ENST00000417503 292 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AL139281.1-201ENST00000422120 335 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.83□□□□□ -1.96
PKNOX1P55347 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 COX6CP2-201ENST00000444980 225 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AL353691.1-201ENST00000451332 387 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 RPL27AP5-201ENST00000469428 449 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC011979.1-201ENST00000472300 483 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 RPS3AP43-201ENST00000479743 781 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 RPL9P33-201ENST00000484311 566 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.83□□□□□ -1.96
PKNOX1P55347 CBX3P3-201ENST00000508108 532 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC008885.1-201ENST00000514930 301 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 SNORA31.1-201ENST00000515993 133 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 SNORA31.5-201ENST00000516190 133 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 HSPA8P13-201ENST00000523715 472 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 PSMA2P1-201ENST00000526365 646 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKNOX1P55347 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
PKNOX1P55347 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AP005205.1-201ENST00000563503 508 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.83□□□□□ -1.96
PKNOX1P55347 AC009220.3-201ENST00000604318 586 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AL022099.1-201ENST00000604551 712 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC106900.2-201ENST00000604994 317 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC243773.3-201ENST00000613270 256 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKNOX1P55347 AL109620.1-201ENST00000618738 1197 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC091953.5-201ENST00000622919 233 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AC009039.2-201ENST00000624524 529 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 LRRC77P-213ENST00000637727 880 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
PKNOX1P55347 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKNOX1P55347 OR4G11P-202ENST00000642116 1414 ntBASIC2.83□□□□□ -1.96
PKNOX1P55347 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.83□□□□□ -1.96
PKNOX1P55347 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKNOX1P55347 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.82□□□□□ -1.96
PKNOX1P55347 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKNOX1P55347 MAPK10-266ENST00000641066 6555 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms