Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RPL7P2-201ENST00000427639 268 ntBASIC3.45□□□□□ -1.86
CDH13P55290 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC109583.1-201ENST00000432156 268 ntBASIC3.45□□□□□ -1.86
CDH13P55290 THAP5P1-201ENST00000439089 262 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL445567.1-201ENST00000439121 144 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL512286.1-201ENST00000439244 400 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL662791.1-201ENST00000441992 928 ntBASIC3.45□□□□□ -1.86
CDH13P55290 RPL7P36-201ENST00000444633 681 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 NUTF2P7-201ENST00000453086 375 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC006539.3-201ENST00000454258 129 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC007967.1-201ENST00000455422 1159 ntBASIC3.45□□□□□ -1.86
CDH13P55290 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 SNORA70.18-201ENST00000516696 98 ntBASIC3.45□□□□□ -1.86
CDH13P55290 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH13P55290 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH13P55290 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 OSBPL9P5-201ENST00000542581 171 ntBASIC3.45□□□□□ -1.86
CDH13P55290 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH13P55290 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 AL391156.1-201ENST00000554965 554 ntBASIC3.45□□□□□ -1.86
CDH13P55290 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH13P55290 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH13P55290 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 AC022146.1-201ENST00000595307 847 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL450472.3-201ENST00000615578 367 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 AC078883.4-201ENST00000623218 367 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AF246928.1-201ENST00000623768 87 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 MIR7153-201ENST00000637758 57 ntBASIC3.45□□□□□ -1.86
CDH13P55290 MTND5P33-201ENST00000571250 1450 ntBASIC3.45□□□□□ -1.86
CDH13P55290 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 AL021368.2-201ENST00000606125 5352 ntBASIC3.45□□□□□ -1.86
CDH13P55290 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH13P55290 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 CCT4P2-201ENST00000233836 1548 ntBASIC3.44□□□□□ -1.86
CDH13P55290 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH13P55290 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 AF127577.6-201ENST00000623352 2191 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 AC012321.1-201ENST00000561622 1588 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AL445523.1-201ENST00000451184 1362 ntBASIC3.44□□□□□ -1.86
CDH13P55290 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDH13P55290 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 RNU6-637P-201ENST00000384050 107 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RNU6-754P-201ENST00000391166 107 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RNU6-920P-201ENST00000410926 92 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RN7SKP53-201ENST00000411337 315 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH13P55290 MTATP6P4-201ENST00000427725 675 ntBASIC3.44□□□□□ -1.86
CDH13P55290 OR4K11P-201ENST00000431829 904 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC024082.2-201ENST00000434771 238 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RPL37P21-201ENST00000435890 276 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC090774.1-201ENST00000435925 246 ntBASIC3.44□□□□□ -1.86
CDH13P55290 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 RN7SL132P-201ENST00000478131 296 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH13P55290 AC119751.5-201ENST00000514077 770 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC026801.2-201ENST00000515352 425 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RNU1-61P-201ENST00000516107 151 ntBASIC3.44□□□□□ -1.86
CDH13P55290 RNU6-759P-201ENST00000516740 103 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.44□□□□□ -1.86
CDH13P55290 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH13P55290 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 AC109446.2-201ENST00000567872 497 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 UBE2L4-201ENST00000587688 464 ntBASIC3.44□□□□□ -1.86
CDH13P55290 PRELID3BP8-201ENST00000604148 295 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 AL392048.1-201ENST00000613946 534 ntBASIC3.44□□□□□ -1.86
CDH13P55290 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH13P55290 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 U4.6-201ENST00000621618 127 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AL158801.5-201ENST00000623123 465 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC243312.2-201ENST00000623340 601 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC095031.1-201ENST00000623685 672 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC068724.3-201ENST00000625906 87 ntBASIC3.44□□□□□ -1.86
CDH13P55290 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 AC092192.1-201ENST00000633154 1018 ntBASIC3.44□□□□□ -1.86
CDH13P55290 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH13P55290 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH13P55290 AL513185.3-201ENST00000433335 1300 ntBASIC3.44□□□□□ -1.86
CDH13P55290 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms