Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC090582.1-201ENST00000636321 199 ntBASIC3.38□□□□□ -1.87
CDH11P55287 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDH11P55287 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDH11P55287 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH11P55287 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
CDH11P55287 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 MTND5P33-201ENST00000571250 1450 ntBASIC3.37□□□□□ -1.87
CDH11P55287 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDH11P55287 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 Y_RNA.194-201ENST00000363985 102 ntBASIC3.37□□□□□ -1.87
CDH11P55287 RNU5E-5P-201ENST00000365379 116 ntBASIC3.37□□□□□ -1.87
CDH11P55287 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDH11P55287 RNU6-1207P-201ENST00000384343 107 ntBASIC3.37□□□□□ -1.87
CDH11P55287 RNY3P10-201ENST00000384764 102 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AL356421.1-201ENST00000403255 413 ntBASIC3.37□□□□□ -1.87
CDH11P55287 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 NOTCH2P1-201ENST00000443481 624 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC099563.1-201ENST00000456086 418 ntBASIC3.37□□□□□ -1.87
CDH11P55287 MTCO1P42-201ENST00000457379 726 ntBASIC3.37□□□□□ -1.87
CDH11P55287 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
CDH11P55287 ACTR3P3-201ENST00000480448 893 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AP001025.2-201ENST00000490908 477 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC034222.1-201ENST00000494052 532 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AP001086.1-201ENST00000494882 321 ntBASIC3.37□□□□□ -1.87
CDH11P55287 MTND4P2-201ENST00000507767 1203 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 RNU6-352P-201ENST00000516908 107 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
CDH11P55287 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH11P55287 AP002748.2-201ENST00000528671 348 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 AC006960.3-201ENST00000561845 705 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC006362.1-201ENST00000567392 174 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 AC012669.1-201ENST00000603209 283 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC128687.1-201ENST00000605304 619 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 AC079684.1-201ENST00000621405 437 ntBASIC3.37□□□□□ -1.87
CDH11P55287 AC112200.1-201ENST00000625015 234 ntBASIC3.37□□□□□ -1.87
CDH11P55287 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CDH11P55287 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 AC244517.1-201ENST00000606030 2086 ntBASIC3.37□□□□□ -1.87
CDH11P55287 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH11P55287 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH11P55287 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 AL645937.1-201ENST00000641739 1652 ntBASIC3.36□□□□□ -1.87
CDH11P55287 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
CDH11P55287 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 AC073073.2-201ENST00000609827 2578 ntBASIC3.36□□□□□ -1.87
CDH11P55287 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.36□□□□□ -1.87
CDH11P55287 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 RNA5SP124-201ENST00000362739 110 ntBASIC3.36□□□□□ -1.87
CDH11P55287 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 SNORA75-201ENST00000384158 137 ntBASIC3.36□□□□□ -1.87
CDH11P55287 SNORD115.1-201ENST00000391109 76 ntBASIC3.36□□□□□ -1.87
CDH11P55287 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 RPS7P15-201ENST00000415804 584 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AL451062.2-201ENST00000427515 271 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AL589823.1-201ENST00000429577 183 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 RPS24P1-201ENST00000438550 371 ntBASIC3.36□□□□□ -1.87
CDH11P55287 CFTRP1-201ENST00000456646 183 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC034236.1-201ENST00000469891 373 ntBASIC3.36□□□□□ -1.87
CDH11P55287 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
CDH11P55287 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 AC026784.1-201ENST00000507986 352 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC006390.1-201ENST00000508068 283 ntBASIC3.36□□□□□ -1.87
CDH11P55287 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH11P55287 AC079140.3-201ENST00000511111 550 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH11P55287 AC017037.2-201ENST00000513850 890 ntBASIC3.36□□□□□ -1.87
CDH11P55287 RNA5SP164-201ENST00000516533 110 ntBASIC3.36□□□□□ -1.87
CDH11P55287 OR4R3P-201ENST00000525084 838 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms