Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SNORD65.1-201ENST00000390889 71 ntBASIC2.93□□□□□ -1.94
CDH4P55283 RNA5SP252-201ENST00000391131 119 ntBASIC2.93□□□□□ -1.94
CDH4P55283 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH4P55283 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
CDH4P55283 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.93□□□□□ -1.94
CDH4P55283 EZH2P1-201ENST00000431167 291 ntBASIC2.93□□□□□ -1.94
CDH4P55283 RPL23AP74-201ENST00000437246 471 ntBASIC2.93□□□□□ -1.94
CDH4P55283 ARF4P4-201ENST00000439608 520 ntBASIC2.93□□□□□ -1.94
CDH4P55283 AC093156.1-201ENST00000440382 670 ntBASIC2.93□□□□□ -1.94
CDH4P55283 AL135938.1-201ENST00000443141 297 ntBASIC2.93□□□□□ -1.94
CDH4P55283 RPL21P41-201ENST00000459863 264 ntBASIC2.93□□□□□ -1.94
CDH4P55283 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH4P55283 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH4P55283 HIGD1AP13-201ENST00000509878 289 ntBASIC2.93□□□□□ -1.94
CDH4P55283 RNU6-1261P-201ENST00000517194 104 ntBASIC2.93□□□□□ -1.94
CDH4P55283 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDH4P55283 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH4P55283 AP003066.2-201ENST00000529375 555 ntBASIC2.93□□□□□ -1.94
CDH4P55283 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH4P55283 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH4P55283 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH4P55283 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.93□□□□□ -1.94
CDH4P55283 MTND4LP25-201ENST00000570218 163 ntBASIC2.93□□□□□ -1.94
CDH4P55283 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.93□□□□□ -1.94
CDH4P55283 AC097504.2-201ENST00000608088 454 ntBASIC2.93□□□□□ -1.94
CDH4P55283 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH4P55283 LRRC77P-213ENST00000637727 880 ntBASIC2.93□□□□□ -1.94
CDH4P55283 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CDH4P55283 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH4P55283 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH4P55283 TAB3P1-202ENST00000452645 1634 ntBASIC2.93□□□□□ -1.94
CDH4P55283 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CDH4P55283 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH4P55283 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH4P55283 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
CDH4P55283 RNU6-236P-201ENST00000363886 106 ntBASIC2.92□□□□□ -1.94
CDH4P55283 RNU6-7-201ENST00000364784 107 ntBASIC2.92□□□□□ -1.94
CDH4P55283 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
CDH4P55283 RNU6-8-201ENST00000365467 107 ntBASIC2.92□□□□□ -1.94
CDH4P55283 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 MIR512-1-201ENST00000384913 84 ntBASIC2.92□□□□□ -1.94
CDH4P55283 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
CDH4P55283 OR4K6P-201ENST00000416478 897 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.92□□□□□ -1.94
CDH4P55283 AL121871.1-201ENST00000443413 436 ntBASIC2.92□□□□□ -1.94
CDH4P55283 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC092902.1-201ENST00000486999 259 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH4P55283 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 RNA5SP367-201ENST00000516557 118 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH4P55283 AC087897.1-201ENST00000550134 156 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH4P55283 AC245036.5-201ENST00000596330 847 ntBASIC2.92□□□□□ -1.94
CDH4P55283 VN1R92P-201ENST00000598511 928 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC013444.2-201ENST00000603317 787 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC090115.4-201ENST00000609970 188 ntBASIC2.92□□□□□ -1.94
CDH4P55283 Z99129.2-201ENST00000619967 314 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AC010338.1-201ENST00000621823 717 ntBASIC2.92□□□□□ -1.94
CDH4P55283 MKKS-204ENST00000639674 192 ntBASIC2.92□□□□□ -1.94
CDH4P55283 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
CDH4P55283 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH4P55283 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH4P55283 SNORA80A-201ENST00000363922 136 ntBASIC2.91□□□□□ -1.94
CDH4P55283 SNORA18.3-201ENST00000384122 132 ntBASIC2.91□□□□□ -1.94
CDH4P55283 MIR135A2-201ENST00000384854 100 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AL079342.2-201ENST00000403367 482 ntBASIC2.91□□□□□ -1.94
CDH4P55283 RPS7P9-201ENST00000414704 586 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH4P55283 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.91□□□□□ -1.94
CDH4P55283 C1DP1-201ENST00000426049 402 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC024082.2-201ENST00000434771 238 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC092427.1-201ENST00000439177 601 ntBASIC2.91□□□□□ -1.94
CDH4P55283 RPS24P13-201ENST00000442520 397 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC112653.1-201ENST00000443851 386 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH4P55283 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH4P55283 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH4P55283 AC005297.2-201ENST00000450430 606 ntBASIC2.91□□□□□ -1.94
CDH4P55283 OFD1P3Y-201ENST00000453312 783 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC023424.2-201ENST00000493479 777 ntBASIC2.91□□□□□ -1.94
CDH4P55283 VN1R104P-201ENST00000505115 1009 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH4P55283 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH4P55283 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH4P55283 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH4P55283 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH4P55283 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH4P55283 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH4P55283 DNAJC8P1-201ENST00000554535 372 ntBASIC2.91□□□□□ -1.94
CDH4P55283 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH4P55283 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH4P55283 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms