Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC118942.1-201ENST00000529674 1035 ntBASIC3.36□□□□□ -1.87
GPC3P51654 AC125611.1-201ENST00000549563 229 ntBASIC3.36□□□□□ -1.87
GPC3P51654 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
GPC3P51654 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.36□□□□□ -1.87
GPC3P51654 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.36□□□□□ -1.87
GPC3P51654 AC013444.2-201ENST00000603317 787 ntBASIC3.36□□□□□ -1.87
GPC3P51654 AL033523.1-201ENST00000605153 153 ntBASIC3.36□□□□□ -1.87
GPC3P51654 AC080013.4-201ENST00000607624 649 ntBASIC3.36□□□□□ -1.87
GPC3P51654 DUXAP10-204ENST00000612052 616 ntBASIC3.36□□□□□ -1.87
GPC3P51654 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
GPC3P51654 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.36□□□□□ -1.87
GPC3P51654 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
GPC3P51654 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
GPC3P51654 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
GPC3P51654 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
GPC3P51654 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC3P51654 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC3P51654 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC3P51654 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
GPC3P51654 RNU6-925P-201ENST00000384629 104 ntBASIC3.35□□□□□ -1.87
GPC3P51654 SNORD65.1-201ENST00000390889 71 ntBASIC3.35□□□□□ -1.87
GPC3P51654 Y_RNA.578-201ENST00000390903 88 ntBASIC3.35□□□□□ -1.87
GPC3P51654 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC3P51654 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.35□□□□□ -1.87
GPC3P51654 BEND7P1-201ENST00000422058 457 ntBASIC3.35□□□□□ -1.87
GPC3P51654 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.35□□□□□ -1.87
GPC3P51654 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.35□□□□□ -1.87
GPC3P51654 RAC1P7-201ENST00000445367 377 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC093392.2-201ENST00000450682 337 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC026410.2-201ENST00000460281 156 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.35□□□□□ -1.87
GPC3P51654 AC096576.1-201ENST00000489014 359 ntBASIC3.35□□□□□ -1.87
GPC3P51654 OR2A20P-203ENST00000498397 1268 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC114967.1-201ENST00000504890 259 ntBASIC3.35□□□□□ -1.87
GPC3P51654 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.35□□□□□ -1.87
GPC3P51654 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.35□□□□□ -1.87
GPC3P51654 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.35□□□□□ -1.87
GPC3P51654 AC119751.5-201ENST00000514077 770 ntBASIC3.35□□□□□ -1.87
GPC3P51654 RNA5SP385-201ENST00000515947 110 ntBASIC3.35□□□□□ -1.87
GPC3P51654 RN7SKP272-201ENST00000516988 232 ntBASIC3.35□□□□□ -1.87
GPC3P51654 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.35□□□□□ -1.87
GPC3P51654 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.35□□□□□ -1.87
GPC3P51654 DEFB130C-202ENST00000530001 230 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
GPC3P51654 AL158050.2-201ENST00000605336 568 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC004832.5-201ENST00000608677 401 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AC091046.2-201ENST00000620775 665 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AL391262.2-201ENST00000622466 494 ntBASIC3.35□□□□□ -1.87
GPC3P51654 AL445984.1-201ENST00000637834 659 ntBASIC3.35□□□□□ -1.87
GPC3P51654 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
GPC3P51654 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.35□□□□□ -1.87
GPC3P51654 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
GPC3P51654 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC3P51654 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
GPC3P51654 RNU6-1027P-201ENST00000383998 107 ntBASIC3.34□□□□□ -1.87
GPC3P51654 MIR1290-201ENST00000408735 78 ntBASIC3.34□□□□□ -1.87
GPC3P51654 RNU2-47P-201ENST00000410649 186 ntBASIC3.34□□□□□ -1.87
GPC3P51654 LUZP4P1-201ENST00000415420 344 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.34□□□□□ -1.87
GPC3P51654 MTND4P3-201ENST00000417829 541 ntBASIC3.34□□□□□ -1.87
GPC3P51654 MTND2P5-201ENST00000432656 1006 ntBASIC3.34□□□□□ -1.87
GPC3P51654 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.34□□□□□ -1.87
GPC3P51654 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.34□□□□□ -1.87
GPC3P51654 AL592447.1-201ENST00000447592 540 ntBASIC3.34□□□□□ -1.87
GPC3P51654 RPL39P6-201ENST00000448289 150 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
GPC3P51654 MTCO3P11-201ENST00000455103 774 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC104164.3-201ENST00000467363 1258 ntBASIC3.34□□□□□ -1.87
GPC3P51654 RPS15AP17-201ENST00000470598 390 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC104982.1-201ENST00000478775 574 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC079203.1-201ENST00000487972 404 ntBASIC3.34□□□□□ -1.87
GPC3P51654 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.34□□□□□ -1.87
GPC3P51654 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.34□□□□□ -1.87
GPC3P51654 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
GPC3P51654 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.34□□□□□ -1.87
GPC3P51654 DNAJC8P1-201ENST00000554535 372 ntBASIC3.34□□□□□ -1.87
GPC3P51654 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.34□□□□□ -1.87
GPC3P51654 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.34□□□□□ -1.87
GPC3P51654 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.34□□□□□ -1.87
GPC3P51654 AC011260.1-201ENST00000578420 472 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AL391834.2-201ENST00000609982 546 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC010975.3-201ENST00000618727 978 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AL137790.1-201ENST00000634283 177 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC107982.1-201ENST00000507171 1300 ntBASIC3.34□□□□□ -1.87
GPC3P51654 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.88
GPC3P51654 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
GPC3P51654 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
GPC3P51654 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
GPC3P51654 DEFB108F-201ENST00000344638 222 ntBASIC3.33□□□□□ -1.88
GPC3P51654 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
GPC3P51654 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GPC3P51654 SNORA46-201ENST00000384762 135 ntBASIC3.33□□□□□ -1.88
GPC3P51654 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
GPC3P51654 MTCO1P56-201ENST00000401674 224 ntBASIC3.33□□□□□ -1.88
GPC3P51654 MTATP6P27-201ENST00000416987 621 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.33□□□□□ -1.88
GPC3P51654 AL139132.1-201ENST00000431587 344 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms