Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC007182.2-201ENST00000489251 402 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 SCARNA22-201ENST00000503991 125 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 BTF3L4P4-201ENST00000506381 449 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC114786.4-201ENST00000508771 728 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC104986.1-201ENST00000517978 436 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 AF235103.2-201ENST00000525753 346 ntBASIC4.91□□□□□ -1.62
MRE11P49959 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 AL845331.3-202ENST00000562856 261 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 AL009028.1-201ENST00000604895 802 ntBASIC4.91□□□□□ -1.62
MRE11P49959 OR6R2P-201ENST00000609216 300 ntBASIC4.91□□□□□ -1.62
MRE11P49959 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 AC006065.6-201ENST00000625201 545 ntBASIC4.91□□□□□ -1.62
MRE11P49959 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 MTND1P37-201ENST00000636562 264 ntBASIC4.91□□□□□ -1.62
MRE11P49959 MIR3662-201ENST00000637030 95 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
MRE11P49959 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
MRE11P49959 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.9□□□□□ -1.62
MRE11P49959 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MRE11P49959 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
MRE11P49959 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
MRE11P49959 MT-TD-201ENST00000387419 68 ntBASIC4.9□□□□□ -1.63
MRE11P49959 DHFRP6-201ENST00000401776 268 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AL022722.2-201ENST00000402519 180 ntBASIC4.9□□□□□ -1.63
MRE11P49959 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.9□□□□□ -1.63
MRE11P49959 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.9□□□□□ -1.63
MRE11P49959 RPL31P35-201ENST00000431058 377 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC087650.1-201ENST00000431445 468 ntBASIC4.9□□□□□ -1.63
MRE11P49959 GOT2P5-201ENST00000433995 546 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 RAD23BP3-201ENST00000454157 1152 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.9□□□□□ -1.63
MRE11P49959 AC026410.2-201ENST00000460281 156 ntBASIC4.9□□□□□ -1.63
MRE11P49959 RPL31P50-201ENST00000471002 296 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC105137.1-201ENST00000484355 562 ntBASIC4.9□□□□□ -1.63
MRE11P49959 RPL31P61-201ENST00000496160 376 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC114967.1-201ENST00000504890 259 ntBASIC4.9□□□□□ -1.63
MRE11P49959 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 Y_RNA.672-201ENST00000516289 104 ntBASIC4.9□□□□□ -1.63
MRE11P49959 IGKV2-38-201ENST00000517443 247 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 SOD1P3-201ENST00000518682 454 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.9□□□□□ -1.63
MRE11P49959 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AC123904.3-201ENST00000547218 814 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.9□□□□□ -1.63
MRE11P49959 AC107954.1-201ENST00000565906 727 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC034268.2-201ENST00000571784 482 ntBASIC4.9□□□□□ -1.63
MRE11P49959 MIR4513-201ENST00000581077 86 ntBASIC4.9□□□□□ -1.63
MRE11P49959 MAGOH2P-202ENST00000584384 429 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.9□□□□□ -1.63
MRE11P49959 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.9□□□□□ -1.63
MRE11P49959 AC010338.1-201ENST00000621823 717 ntBASIC4.9□□□□□ -1.63
MRE11P49959 AL732618.1-201ENST00000623251 301 ntBASIC4.9□□□□□ -1.63
MRE11P49959 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.9□□□□□ -1.63
MRE11P49959 CCT4P2-201ENST00000233836 1548 ntBASIC4.9□□□□□ -1.63
MRE11P49959 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MRE11P49959 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MRE11P49959 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.9□□□□□ -1.63
MRE11P49959 NCAPGP1-201ENST00000505112 1814 ntBASIC4.9□□□□□ -1.63
MRE11P49959 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MRE11P49959 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MRE11P49959 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.9□□□□□ -1.63
MRE11P49959 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
MRE11P49959 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
MRE11P49959 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
MRE11P49959 RPL23AP57-201ENST00000332361 466 ntBASIC4.89□□□□□ -1.63
MRE11P49959 Y_RNA.263-201ENST00000364659 114 ntBASIC4.89□□□□□ -1.63
MRE11P49959 RNU6-921P-201ENST00000384361 107 ntBASIC4.89□□□□□ -1.63
MRE11P49959 Y_RNA.535-201ENST00000384612 99 ntBASIC4.89□□□□□ -1.63
MRE11P49959 Z98941.1-201ENST00000407764 100 ntBASIC4.89□□□□□ -1.63
MRE11P49959 RNU6ATAC-201ENST00000408749 126 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.89□□□□□ -1.63
MRE11P49959 TPMTP2-201ENST00000414372 726 ntBASIC4.89□□□□□ -1.63
MRE11P49959 MTND3P17-201ENST00000416968 344 ntBASIC4.89□□□□□ -1.63
MRE11P49959 ZNF90P2-204ENST00000419323 1075 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC133104.1-201ENST00000429100 218 ntBASIC4.89□□□□□ -1.63
MRE11P49959 RPS3AP54-201ENST00000435535 734 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AC132479.1-201ENST00000449160 144 ntBASIC4.89□□□□□ -1.63
MRE11P49959 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.89□□□□□ -1.63
MRE11P49959 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.89□□□□□ -1.63
MRE11P49959 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MRE11P49959 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms