Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CENPFP49454 RNU6-37P-201ENST00000362692 107 ntBASIC1.82□□□□□ -2.12
CENPFP49454 RNU6-11P-201ENST00000364234 107 ntBASIC1.82□□□□□ -2.12
CENPFP49454 RPL39P40-201ENST00000445481 146 ntBASIC1.82□□□□□ -2.12
CENPFP49454 AC034222.1-201ENST00000494052 532 ntBASIC1.82□□□□□ -2.12
CENPFP49454 RNU2-58P-201ENST00000516403 183 ntBASIC1.82□□□□□ -2.12
CENPFP49454 AC090751.1-201ENST00000566966 267 ntBASIC1.82□□□□□ -2.12
CENPFP49454 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CENPFP49454 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CENPFP49454 RNA5SP139-201ENST00000364340 117 ntBASIC1.82□□□□□ -2.12
CENPFP49454 DEFB109C-201ENST00000382575 264 ntBASIC1.82□□□□□ -2.12
CENPFP49454 DEFB109B-201ENST00000382656 264 ntBASIC1.82□□□□□ -2.12
CENPFP49454 RNU6-1105P-201ENST00000384774 107 ntBASIC1.82□□□□□ -2.12
CENPFP49454 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.82□□□□□ -2.12
CENPFP49454 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.82□□□□□ -2.12
CENPFP49454 AL049840.6-202ENST00000603373 279 ntBASIC1.82□□□□□ -2.12
CENPFP49454 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CENPFP49454 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CENPFP49454 AL136133.1-201ENST00000413694 376 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.81□□□□□ -2.12
CENPFP49454 AL365400.1-201ENST00000431854 640 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.81□□□□□ -2.12
CENPFP49454 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.81□□□□□ -2.12
CENPFP49454 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.81□□□□□ -2.12
CENPFP49454 AC114801.2-201ENST00000503825 781 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC109471.1-201ENST00000511631 612 ntBASIC1.81□□□□□ -2.12
CENPFP49454 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.81□□□□□ -2.12
CENPFP49454 Y_RNA.681-201ENST00000516445 113 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC103810.1-201ENST00000579873 453 ntBASIC1.81□□□□□ -2.12
CENPFP49454 7SK.7-201ENST00000603504 247 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC093775.1-201ENST00000624154 1868 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CENPFP49454 RNU4-51P-201ENST00000364206 140 ntBASIC1.81□□□□□ -2.12
CENPFP49454 MTND1P18-201ENST00000448191 573 ntBASIC1.81□□□□□ -2.12
CENPFP49454 HAR1A.1-201ENST00000459583 118 ntBASIC1.81□□□□□ -2.12
CENPFP49454 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.81□□□□□ -2.12
CENPFP49454 AC007536.1-201ENST00000533382 349 ntBASIC1.81□□□□□ -2.12
CENPFP49454 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CENPFP49454 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.81□□□□□ -2.12
CENPFP49454 DDX10P1-201ENST00000448545 1933 ntBASIC1.81□□□□□ -2.12
CENPFP49454 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CENPFP49454 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CENPFP49454 RNU4-13P-201ENST00000364019 141 ntBASIC1.81□□□□□ -2.12
CENPFP49454 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.81□□□□□ -2.12
CENPFP49454 XKRYP4-201ENST00000414395 483 ntBASIC1.81□□□□□ -2.12
CENPFP49454 XKRYP5-201ENST00000449659 483 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AIG1P1-201ENST00000503376 148 ntBASIC1.81□□□□□ -2.12
CENPFP49454 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.81□□□□□ -2.12
CENPFP49454 GLYCAM1-201ENST00000546596 285 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC006023.2-201ENST00000609916 167 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC012150.2-201ENST00000621300 544 ntBASIC1.81□□□□□ -2.12
CENPFP49454 AC092159.4-201ENST00000624944 550 ntBASIC1.81□□□□□ -2.12
CENPFP49454 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CENPFP49454 DYNLT3P1-201ENST00000378574 347 ntBASIC1.8□□□□□ -2.12
CENPFP49454 HMGB1P45-201ENST00000435986 653 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AC008571.1-201ENST00000467232 300 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.8□□□□□ -2.12
CENPFP49454 AC087241.2-201ENST00000535801 324 ntBASIC1.8□□□□□ -2.12
CENPFP49454 NIFKP8-201ENST00000560500 874 ntBASIC1.8□□□□□ -2.12
CENPFP49454 ZNF876P-202ENST00000398732 1485 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CENPFP49454 RNU6-174P-201ENST00000410406 106 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.8□□□□□ -2.12
CENPFP49454 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.8□□□□□ -2.12
CENPFP49454 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.8□□□□□ -2.12
CENPFP49454 AC109446.2-201ENST00000567872 497 ntBASIC1.8□□□□□ -2.12
CENPFP49454 MIR1273G-201ENST00000577677 100 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AC092954.1-201ENST00000609121 445 ntBASIC1.8□□□□□ -2.12
CENPFP49454 VIS1.1-201ENST00000610517 203 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AC034102.8-201ENST00000615146 484 ntBASIC1.8□□□□□ -2.12
CENPFP49454 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
CENPFP49454 RNA5SP27-201ENST00000363839 119 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AL354695.1-201ENST00000427935 228 ntBASIC1.79□□□□□ -2.12
CENPFP49454 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
CENPFP49454 HMGN1P8-201ENST00000463578 288 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AL137100.2-201ENST00000555786 315 ntBASIC1.79□□□□□ -2.12
CENPFP49454 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CENPFP49454 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CENPFP49454 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CENPFP49454 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
CENPFP49454 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CENPFP49454 RNU1-22P-201ENST00000363334 158 ntBASIC1.79□□□□□ -2.12
CENPFP49454 Y_RNA.433-201ENST00000384089 102 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AL353093.1-201ENST00000441292 436 ntBASIC1.79□□□□□ -2.12
CENPFP49454 HMGN2P18-201ENST00000450680 270 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AL021397.1-201ENST00000451806 248 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.79□□□□□ -2.12
CENPFP49454 MIR98-201ENST00000606724 119 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AC110774.1-201ENST00000623567 2018 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.79□□□□□ -2.12
CENPFP49454 AC013444.2-201ENST00000603317 787 ntBASIC1.79□□□□□ -2.12
CENPFP49454 AC243773.3-201ENST00000613270 256 ntBASIC1.79□□□□□ -2.12
CENPFP49454 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
CENPFP49454 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CENPFP49454 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CENPFP49454 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.78□□□□□ -2.12
CENPFP49454 CDC27P3-201ENST00000635418 1910 ntBASIC1.78□□□□□ -2.12
CENPFP49454 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CENPFP49454 AL359273.1-201ENST00000510918 627 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms