Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AC093809.1-201ENST00000509155 340 ntBASIC3.49□□□□□ -1.85
LHX1P48742 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 RNU6-678P-201ENST00000516832 109 ntBASIC3.49□□□□□ -1.85
LHX1P48742 SNORA70.24-201ENST00000517233 118 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.49□□□□□ -1.85
LHX1P48742 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.49□□□□□ -1.85
LHX1P48742 CR383656.7-201ENST00000548164 174 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AL353997.4-201ENST00000586196 166 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AC018714.1-201ENST00000605028 208 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL031667.3-201ENST00000620124 655 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AC009039.2-201ENST00000624524 529 ntBASIC3.49□□□□□ -1.85
LHX1P48742 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.49□□□□□ -1.85
LHX1P48742 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LHX1P48742 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.48□□□□□ -1.85
LHX1P48742 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LHX1P48742 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LHX1P48742 RNU1-70P-201ENST00000362618 164 ntBASIC3.48□□□□□ -1.85
LHX1P48742 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LHX1P48742 RNU6-1074P-201ENST00000383995 104 ntBASIC3.48□□□□□ -1.85
LHX1P48742 RPS15AP38-201ENST00000413110 372 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC107081.1-201ENST00000414975 361 ntBASIC3.48□□□□□ -1.85
LHX1P48742 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AC234781.2-201ENST00000426370 994 ntBASIC3.48□□□□□ -1.85
LHX1P48742 MTND1P20-201ENST00000430341 950 ntBASIC3.48□□□□□ -1.85
LHX1P48742 CETN4P-201ENST00000432407 469 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC109925.1-201ENST00000478069 331 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC092451.1-201ENST00000480211 153 ntBASIC3.48□□□□□ -1.85
LHX1P48742 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 AC004062.1-201ENST00000509926 645 ntBASIC3.48□□□□□ -1.85
LHX1P48742 MTND5P4-201ENST00000514978 288 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.48□□□□□ -1.85
LHX1P48742 RN7SKP244-201ENST00000516513 307 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AC008015.1-201ENST00000555505 465 ntBASIC3.48□□□□□ -1.85
LHX1P48742 RPL21P12-201ENST00000559810 515 ntBASIC3.48□□□□□ -1.85
LHX1P48742 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 AC136618.2-201ENST00000575091 400 ntBASIC3.48□□□□□ -1.85
LHX1P48742 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.48□□□□□ -1.85
LHX1P48742 AC008751.2-201ENST00000597885 980 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC007687.1-201ENST00000602704 304 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AL161756.2-201ENST00000604597 246 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC018638.7-201ENST00000605836 1114 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AC072039.2-201ENST00000608883 439 ntBASIC3.48□□□□□ -1.85
LHX1P48742 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
LHX1P48742 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.48□□□□□ -1.85
LHX1P48742 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.48□□□□□ -1.85
LHX1P48742 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.48□□□□□ -1.85
LHX1P48742 AP003485.2-201ENST00000623636 610 ntBASIC3.48□□□□□ -1.85
LHX1P48742 MIR3651-201ENST00000630427 90 ntBASIC3.48□□□□□ -1.85
LHX1P48742 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.48□□□□□ -1.85
LHX1P48742 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LHX1P48742 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LHX1P48742 RNU6-433P-201ENST00000363216 104 ntBASIC3.47□□□□□ -1.85
LHX1P48742 Y_RNA.302-201ENST00000364997 102 ntBASIC3.47□□□□□ -1.85
LHX1P48742 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX1P48742 SNORA9-201ENST00000384215 133 ntBASIC3.47□□□□□ -1.85
LHX1P48742 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX1P48742 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.47□□□□□ -1.85
LHX1P48742 AC063979.1-201ENST00000415539 377 ntBASIC3.47□□□□□ -1.85
LHX1P48742 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.47□□□□□ -1.85
LHX1P48742 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 RPS6P15-201ENST00000431996 751 ntBASIC3.47□□□□□ -1.85
LHX1P48742 VDAC1P3-201ENST00000434069 851 ntBASIC3.47□□□□□ -1.85
LHX1P48742 UBE2FP3-201ENST00000436366 524 ntBASIC3.47□□□□□ -1.85
LHX1P48742 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX1P48742 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 MTCO1P27-201ENST00000448269 226 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms