Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX2P48431 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SOX2P48431 RNU6-754P-201ENST00000391166 107 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RNU2-9P-201ENST00000410194 145 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RNU6-712P-201ENST00000410558 100 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX2P48431 ZNF90P2-204ENST00000419323 1075 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RPS12P23-201ENST00000419579 400 ntBASIC3.72□□□□□ -1.81
SOX2P48431 EIF1P3-201ENST00000423841 334 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX2P48431 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX2P48431 BNIP3P2-201ENST00000441221 577 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.72□□□□□ -1.81
SOX2P48431 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX2P48431 FDX1P2-201ENST00000450769 375 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RPL36AP13-201ENST00000457490 317 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC083798.1-201ENST00000472671 131 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC007686.1-201ENST00000488511 463 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX2P48431 RNU6-1095P-201ENST00000516148 108 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RNU2-10P-201ENST00000516375 211 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RNU6-358P-201ENST00000516564 75 ntBASIC3.72□□□□□ -1.81
SOX2P48431 DEFB108D-201ENST00000527787 222 ntBASIC3.72□□□□□ -1.81
SOX2P48431 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX2P48431 CBX3P5-201ENST00000552017 521 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX2P48431 AL109766.1-201ENST00000555080 552 ntBASIC3.72□□□□□ -1.81
SOX2P48431 OR4K8P-201ENST00000578842 1048 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC007448.1-201ENST00000582714 234 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX2P48431 GLUD1P4-201ENST00000590914 418 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC012669.1-201ENST00000603209 283 ntBASIC3.72□□□□□ -1.81
SOX2P48431 RNA5SP108-201ENST00000605921 117 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC103710.2-201ENST00000609912 942 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AL020991.1-201ENST00000612314 373 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AC093838.1-201ENST00000613014 469 ntBASIC3.72□□□□□ -1.81
SOX2P48431 AL603758.1-201ENST00000618654 241 ntBASIC3.72□□□□□ -1.81
SOX2P48431 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX2P48431 FER-210ENST00000628534 558 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX2P48431 ZNF680P1-201ENST00000436625 1469 ntBASIC3.72□□□□□ -1.81
SOX2P48431 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX2P48431 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SOX2P48431 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.71□□□□□ -1.81
SOX2P48431 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX2P48431 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX2P48431 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 RNU6-223P-201ENST00000362830 107 ntBASIC3.71□□□□□ -1.82
SOX2P48431 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SOX2P48431 MIR1-2-201ENST00000384961 85 ntBASIC3.71□□□□□ -1.82
SOX2P48431 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX2P48431 AC068050.1-201ENST00000394891 380 ntBASIC3.71□□□□□ -1.82
SOX2P48431 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 AL132765.1-201ENST00000434165 553 ntBASIC3.71□□□□□ -1.82
SOX2P48431 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 PTMAP6-201ENST00000439110 327 ntBASIC3.71□□□□□ -1.82
SOX2P48431 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 DHFRP3-201ENST00000455595 559 ntBASIC3.71□□□□□ -1.82
SOX2P48431 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.71□□□□□ -1.82
SOX2P48431 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AP000676.2-201ENST00000529711 301 ntBASIC3.71□□□□□ -1.82
SOX2P48431 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.71□□□□□ -1.82
SOX2P48431 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AC128657.1-201ENST00000549459 145 ntBASIC3.71□□□□□ -1.82
SOX2P48431 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX2P48431 AC044860.2-201ENST00000561005 179 ntBASIC3.71□□□□□ -1.82
SOX2P48431 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 AP005019.3-201ENST00000620418 560 ntBASIC3.71□□□□□ -1.82
SOX2P48431 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 AC131971.1-201ENST00000332881 1482 ntBASIC3.71□□□□□ -1.82
SOX2P48431 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX2P48431 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
SOX2P48431 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX2P48431 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 HSPE1P11-201ENST00000339579 310 ntBASIC3.7□□□□□ -1.82
SOX2P48431 MIR331-201ENST00000362302 94 ntBASIC3.7□□□□□ -1.82
SOX2P48431 Y_RNA.381-201ENST00000365666 102 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNA5SP332-201ENST00000391063 115 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNU6-876P-201ENST00000391295 104 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL645927.1-201ENST00000396783 406 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL583835.1-201ENST00000399570 407 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL109755.1-201ENST00000401791 649 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RPS3AP24-201ENST00000407896 734 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms