Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.72□□□□□ -1.81
HADHAP40939 AC006378.2-201ENST00000623178 2476 ntBASIC3.72□□□□□ -1.81
HADHAP40939 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HADHAP40939 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HADHAP40939 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HADHAP40939 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HADHAP40939 RNU6-637P-201ENST00000384050 107 ntBASIC3.71□□□□□ -1.82
HADHAP40939 RNU6-769P-201ENST00000384407 104 ntBASIC3.71□□□□□ -1.82
HADHAP40939 RNU4-72P-201ENST00000410754 173 ntBASIC3.71□□□□□ -1.82
HADHAP40939 RPL30P2-201ENST00000414021 291 ntBASIC3.71□□□□□ -1.82
HADHAP40939 HMGB3P20-201ENST00000417997 600 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC011233.1-201ENST00000422812 283 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC024082.2-201ENST00000434771 238 ntBASIC3.71□□□□□ -1.82
HADHAP40939 NOTCH2P1-201ENST00000443481 624 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.71□□□□□ -1.82
HADHAP40939 OR6K1P-201ENST00000456766 971 ntBASIC3.71□□□□□ -1.82
HADHAP40939 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC091153.1-201ENST00000466297 402 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC026784.1-201ENST00000507986 352 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.71□□□□□ -1.82
HADHAP40939 AC023161.2-201ENST00000551218 780 ntBASIC3.71□□□□□ -1.82
HADHAP40939 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.71□□□□□ -1.82
HADHAP40939 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
HADHAP40939 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.71□□□□□ -1.82
HADHAP40939 BNIP3P22-201ENST00000593399 556 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.71□□□□□ -1.82
HADHAP40939 Z99129.2-201ENST00000619967 314 ntBASIC3.71□□□□□ -1.82
HADHAP40939 CR392039.5-201ENST00000623201 510 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AC091965.5-201ENST00000624785 342 ntBASIC3.71□□□□□ -1.82
HADHAP40939 AP000553.6-201ENST00000641242 118 ntBASIC3.71□□□□□ -1.82
HADHAP40939 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
HADHAP40939 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HADHAP40939 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HADHAP40939 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HADHAP40939 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
HADHAP40939 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
HADHAP40939 AF117829.1-206ENST00000621883 3802 ntBASIC3.7□□□□□ -1.82
HADHAP40939 SDAD1P2-201ENST00000441308 2028 ntBASIC3.7□□□□□ -1.82
HADHAP40939 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 RNU6-223P-201ENST00000362830 107 ntBASIC3.7□□□□□ -1.82
HADHAP40939 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 RNU6-114P-201ENST00000384704 105 ntBASIC3.7□□□□□ -1.82
HADHAP40939 MIR449B-201ENST00000384995 97 ntBASIC3.7□□□□□ -1.82
HADHAP40939 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.7□□□□□ -1.82
HADHAP40939 SOD2P1-201ENST00000396543 562 ntBASIC3.7□□□□□ -1.82
HADHAP40939 RPS3AP24-201ENST00000407896 734 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.7□□□□□ -1.82
HADHAP40939 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 BX119904.4-201ENST00000424402 301 ntBASIC3.7□□□□□ -1.82
HADHAP40939 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.7□□□□□ -1.82
HADHAP40939 NEK4P1-201ENST00000433383 879 ntBASIC3.7□□□□□ -1.82
HADHAP40939 UBE2D3P1-201ENST00000436669 444 ntBASIC3.7□□□□□ -1.82
HADHAP40939 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.7□□□□□ -1.82
HADHAP40939 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HADHAP40939 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
HADHAP40939 OR6C5P-201ENST00000452388 923 ntBASIC3.7□□□□□ -1.82
HADHAP40939 ART2BP-201ENST00000453501 499 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC068587.2-201ENST00000478386 781 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC108860.1-201ENST00000484521 383 ntBASIC3.7□□□□□ -1.82
HADHAP40939 RNU6-232P-201ENST00000517144 64 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC013828.2-201ENST00000532487 235 ntBASIC3.7□□□□□ -1.82
HADHAP40939 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.7□□□□□ -1.82
HADHAP40939 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.7□□□□□ -1.82
HADHAP40939 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 PCMTD1P2-201ENST00000565017 355 ntBASIC3.7□□□□□ -1.82
HADHAP40939 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 RNVU1-4-201ENST00000612985 164 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC122133.1-201ENST00000613964 233 ntBASIC3.7□□□□□ -1.82
HADHAP40939 MIR7844-201ENST00000616161 122 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HADHAP40939 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC120349.3-201ENST00000624377 529 ntBASIC3.7□□□□□ -1.82
HADHAP40939 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
HADHAP40939 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HADHAP40939 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.7□□□□□ -1.82
HADHAP40939 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.7□□□□□ -1.82
HADHAP40939 AC021755.1-201ENST00000559747 1447 ntBASIC3.7□□□□□ -1.82
HADHAP40939 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.69□□□□□ -1.82
HADHAP40939 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HADHAP40939 RNU6-754P-201ENST00000391166 107 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL359704.1-201ENST00000411586 781 ntBASIC3.69□□□□□ -1.82
HADHAP40939 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.69□□□□□ -1.82
HADHAP40939 Z99497.1-201ENST00000421282 135 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms