Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC109329.2-201ENST00000519658 482 ntBASIC1.67□□□□□ -2.14
SNCAP37840 AC103783.1-201ENST00000520506 373 ntBASIC1.67□□□□□ -2.14
SNCAP37840 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNCAP37840 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
SNCAP37840 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNCAP37840 AL162373.1-201ENST00000620433 407 ntBASIC1.67□□□□□ -2.14
SNCAP37840 RNU6-156P-201ENST00000621869 107 ntBASIC1.67□□□□□ -2.14
SNCAP37840 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNCAP37840 AC009812.4-201ENST00000569134 1805 ntBASIC1.67□□□□□ -2.14
SNCAP37840 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNCAP37840 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.67□□□□□ -2.14
SNCAP37840 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNCAP37840 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNCAP37840 AC022031.1-201ENST00000585985 2593 ntBASIC1.66□□□□□ -2.14
SNCAP37840 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SNCAP37840 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SNCAP37840 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SNCAP37840 MTCO3P4-201ENST00000419236 787 ntBASIC1.66□□□□□ -2.14
SNCAP37840 RPL7P30-201ENST00000420888 709 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.66□□□□□ -2.14
SNCAP37840 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
SNCAP37840 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.66□□□□□ -2.14
SNCAP37840 PSPHP1-201ENST00000450062 261 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.66□□□□□ -2.14
SNCAP37840 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.66□□□□□ -2.14
SNCAP37840 AL049838.1-201ENST00000563647 981 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.66□□□□□ -2.14
SNCAP37840 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.66□□□□□ -2.14
SNCAP37840 AL160281.1-201ENST00000605307 311 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AL136363.1-201ENST00000605349 337 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC120053.1-201ENST00000607706 736 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC104307.1-201ENST00000616142 196 ntBASIC1.66□□□□□ -2.14
SNCAP37840 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.66□□□□□ -2.14
SNCAP37840 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
SNCAP37840 AC008669.1-201ENST00000565823 2178 ntBASIC1.66□□□□□ -2.14
SNCAP37840 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SNCAP37840 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SNCAP37840 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.14
SNCAP37840 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
SNCAP37840 RNU6-461P-201ENST00000364195 107 ntBASIC1.65□□□□□ -2.15
SNCAP37840 MIR1250-201ENST00000408098 113 ntBASIC1.65□□□□□ -2.15
SNCAP37840 RNU4-53P-201ENST00000410828 140 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.65□□□□□ -2.15
SNCAP37840 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.65□□□□□ -2.15
SNCAP37840 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.65□□□□□ -2.15
SNCAP37840 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.65□□□□□ -2.15
SNCAP37840 MTCYBP34-201ENST00000439552 670 ntBASIC1.65□□□□□ -2.15
SNCAP37840 SDCBPP1-201ENST00000440192 890 ntBASIC1.65□□□□□ -2.15
SNCAP37840 USP9YP8-201ENST00000441913 500 ntBASIC1.65□□□□□ -2.15
SNCAP37840 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.65□□□□□ -2.15
SNCAP37840 CBWD4P-201ENST00000445695 655 ntBASIC1.65□□□□□ -2.15
SNCAP37840 COX6CP12-201ENST00000446748 202 ntBASIC1.65□□□□□ -2.15
SNCAP37840 RNU7-26P-201ENST00000458980 63 ntBASIC1.65□□□□□ -2.15
SNCAP37840 snoU13.7-201ENST00000459220 104 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.65□□□□□ -2.15
SNCAP37840 OR5BM1P-201ENST00000512021 366 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC016065.2-201ENST00000514530 444 ntBASIC1.65□□□□□ -2.15
SNCAP37840 HMGN1P28-201ENST00000521340 364 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.65□□□□□ -2.15
SNCAP37840 AC009063.1-201ENST00000563342 702 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.65□□□□□ -2.15
SNCAP37840 OR1M4P-201ENST00000589199 287 ntBASIC1.65□□□□□ -2.15
SNCAP37840 BNIP3P22-201ENST00000593399 556 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC135178.6-201ENST00000605314 398 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AL590099.1-201ENST00000615276 138 ntBASIC1.65□□□□□ -2.15
SNCAP37840 AC068880.5-201ENST00000624331 290 ntBASIC1.65□□□□□ -2.15
SNCAP37840 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SNCAP37840 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.64□□□□□ -2.15
SNCAP37840 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
SNCAP37840 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.64□□□□□ -2.15
SNCAP37840 U3.12-201ENST00000364498 214 ntBASIC1.64□□□□□ -2.15
SNCAP37840 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SNCAP37840 OR4K6P-201ENST00000416478 897 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AL356320.2-201ENST00000417263 507 ntBASIC1.64□□□□□ -2.15
SNCAP37840 HMGN2P19-201ENST00000425149 265 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AC114973.1-201ENST00000429057 632 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AL606490.8-201ENST00000441624 319 ntBASIC1.64□□□□□ -2.15
SNCAP37840 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.64□□□□□ -2.15
SNCAP37840 AC004062.1-201ENST00000509926 645 ntBASIC1.64□□□□□ -2.15
SNCAP37840 RN7SKP283-201ENST00000517197 270 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.64□□□□□ -2.15
SNCAP37840 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.64□□□□□ -2.15
SNCAP37840 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.64□□□□□ -2.15
SNCAP37840 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.64□□□□□ -2.15
SNCAP37840 AC026464.5-201ENST00000562497 722 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AGGF1P5-201ENST00000567900 919 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
SNCAP37840 MIR3162-201ENST00000581818 82 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AL390838.2-201ENST00000602394 274 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.64□□□□□ -2.15
SNCAP37840 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SNCAP37840 HMGB1P24-202ENST00000615653 685 ntBASIC1.64□□□□□ -2.15
SNCAP37840 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.64□□□□□ -2.15
SNCAP37840 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.64□□□□□ -2.15
SNCAP37840 AC046144.1-201ENST00000478559 1853 ntBASIC1.64□□□□□ -2.15
SNCAP37840 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
SNCAP37840 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SNCAP37840 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SNCAP37840 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SNCAP37840 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms