Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC12P31275 RPL21P112-201ENST00000434403 463 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AC005019.1-201ENST00000436455 431 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC12P31275 NEFMP1-201ENST00000443423 1006 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXC12P31275 Z92846.1-201ENST00000456203 268 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 RPS3AP41-201ENST00000462701 778 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 VN1R17P-201ENST00000472048 1090 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 RPL21P93-201ENST00000480465 489 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AC068587.1-201ENST00000483613 781 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 RPS4XP20-201ENST00000505751 772 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 Y_RNA.689-201ENST00000516589 107 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC12P31275 AC008489.1-201ENST00000524271 483 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AP006587.4-201ENST00000526053 529 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXC12P31275 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXC12P31275 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXC12P31275 AC009597.2-201ENST00000604659 592 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 MIR6133-201ENST00000617057 108 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AL359757.2-201ENST00000624309 274 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HOXC12P31275 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC12P31275 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC12P31275 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC12P31275 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC12P31275 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC12P31275 AC092747.4-201ENST00000620519 1861 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC12P31275 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 SNORA17.1-201ENST00000362945 126 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 Y_RNA.132-201ENST00000363421 102 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 Y_RNA.339-201ENST00000365325 102 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 SNORA51.8-201ENST00000384234 132 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 SNORD3H-201ENST00000384486 214 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RNU6-1127P-201ENST00000384580 107 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 MIR600-201ENST00000385007 98 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RNA5SP219-201ENST00000390940 113 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 EIF4E2P1-201ENST00000393781 255 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 SNORA11-201ENST00000408789 128 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RNU4-14P-201ENST00000410858 122 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RN7SKP126-201ENST00000411143 300 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RPL7AP73-201ENST00000413490 353 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC074085.1-201ENST00000413598 418 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC12P31275 VN1R36P-201ENST00000414936 291 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC12P31275 AL451139.1-201ENST00000434718 346 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 NDUFB4P8-201ENST00000435351 367 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC12P31275 PRPF38AP2-201ENST00000438179 851 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RPS15AP27-201ENST00000449183 343 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC104634.1-201ENST00000452720 462 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RPS29P33-201ENST00000456717 146 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 TRBV1-201ENST00000476502 284 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC12P31275 TRBVA-201ENST00000498804 316 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC12P31275 RNU6-189P-201ENST00000516120 101 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RNU6-566P-201ENST00000516790 107 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 SCARNA20.4-201ENST00000516969 131 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 Y_RNA.718-201ENST00000517110 102 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 RNU4-60P-201ENST00000517239 135 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC12P31275 AC092490.3-201ENST00000545370 572 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AL121603.1-201ENST00000553815 142 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC020661.2-201ENST00000560114 134 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC12P31275 MIR3936-201ENST00000584304 110 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 XIAPP1-201ENST00000603162 600 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC104662.1-201ENST00000604448 511 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 MIR378J-201ENST00000611988 109 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AL627230.1-201ENST00000613077 211 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC134503.1-201ENST00000633048 54 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 AC135068.12-201ENST00000637370 931 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC12P31275 AC100757.1-201ENST00000616872 1835 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC12P31275 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC12P31275 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HOXC12P31275 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC12P31275 MAPK10-263ENST00000641052 4307 ntBASIC4.64□□□□□ -1.67
HOXC12P31275 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HOXC12P31275 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms