Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RXRBP28702 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RXRBP28702 Y_RNA.255-201ENST00000364581 97 ntBASIC5.74□□□□□ -1.49
RXRBP28702 SNORA20.2-201ENST00000383922 131 ntBASIC5.74□□□□□ -1.49
RXRBP28702 RNU6-1297P-201ENST00000384415 104 ntBASIC5.74□□□□□ -1.49
RXRBP28702 SNORA48.2-201ENST00000390926 124 ntBASIC5.74□□□□□ -1.49
RXRBP28702 RNY4P36-201ENST00000391116 96 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.74□□□□□ -1.49
RXRBP28702 AC234782.4-201ENST00000417646 1048 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 RPL32P28-201ENST00000443577 397 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AL583843.1-201ENST00000456070 346 ntBASIC5.74□□□□□ -1.49
RXRBP28702 UBE2DNL-203ENST00000474922 222 ntBASIC5.74□□□□□ -1.49
RXRBP28702 RN7SL283P-201ENST00000489055 303 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.74□□□□□ -1.49
RXRBP28702 AC010587.1-201ENST00000505809 469 ntBASIC5.74□□□□□ -1.49
RXRBP28702 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.74□□□□□ -1.49
RXRBP28702 FTH1P9-201ENST00000513251 355 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 AC114797.1-201ENST00000514003 728 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 FTH1P11-201ENST00000517577 551 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC022634.1-201ENST00000520765 532 ntBASIC5.74□□□□□ -1.49
RXRBP28702 IGKV2D-19-201ENST00000523346 262 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AF279873.1-201ENST00000523393 313 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.74□□□□□ -1.49
RXRBP28702 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.74□□□□□ -1.49
RXRBP28702 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 AC090312.1-201ENST00000580637 348 ntBASIC5.74□□□□□ -1.49
RXRBP28702 VN1R84P-201ENST00000593697 235 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RXRBP28702 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.74□□□□□ -1.49
RXRBP28702 AL445363.3-201ENST00000623080 671 ntBASIC5.74□□□□□ -1.49
RXRBP28702 AL359757.2-201ENST00000624309 274 ntBASIC5.74□□□□□ -1.49
RXRBP28702 CR392039.4-201ENST00000624968 501 ntBASIC5.74□□□□□ -1.49
RXRBP28702 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
RXRBP28702 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RXRBP28702 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RXRBP28702 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.74□□□□□ -1.49
RXRBP28702 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
RXRBP28702 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RXRBP28702 AP005432.1-201ENST00000580891 3485 ntBASIC5.73□□□□□ -1.49
RXRBP28702 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RXRBP28702 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RXRBP28702 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.73□□□□□ -1.49
RXRBP28702 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 AC073343.1-201ENST00000328239 651 ntBASIC5.73□□□□□ -1.49
RXRBP28702 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 Y_RNA.197-201ENST00000364004 102 ntBASIC5.73□□□□□ -1.49
RXRBP28702 RNU6-343P-201ENST00000364709 104 ntBASIC5.73□□□□□ -1.49
RXRBP28702 SNORA70.6-201ENST00000383934 134 ntBASIC5.73□□□□□ -1.49
RXRBP28702 MIR1-2-201ENST00000384961 85 ntBASIC5.73□□□□□ -1.49
RXRBP28702 MT-TG-201ENST00000387429 68 ntBASIC5.73□□□□□ -1.49
RXRBP28702 DHFRP6-201ENST00000401776 268 ntBASIC5.73□□□□□ -1.49
RXRBP28702 MIR548F4-201ENST00000408515 105 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC114482.1-201ENST00000418010 247 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AL451054.2-201ENST00000420896 202 ntBASIC5.73□□□□□ -1.49
RXRBP28702 HSPE1P1-201ENST00000421494 318 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC005517.2-201ENST00000424673 553 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.73□□□□□ -1.49
RXRBP28702 CBX3P6-201ENST00000430257 527 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.73□□□□□ -1.49
RXRBP28702 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.73□□□□□ -1.49
RXRBP28702 AL731563.1-201ENST00000442202 214 ntBASIC5.73□□□□□ -1.49
RXRBP28702 FAM103A2P-201ENST00000444122 354 ntBASIC5.73□□□□□ -1.49
RXRBP28702 RPL23AP12-201ENST00000467573 473 ntBASIC5.73□□□□□ -1.49
RXRBP28702 RPS15AP17-201ENST00000470598 390 ntBASIC5.73□□□□□ -1.49
RXRBP28702 VN1R17P-201ENST00000472048 1090 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC012181.1-201ENST00000479895 423 ntBASIC5.73□□□□□ -1.49
RXRBP28702 TMEM251P1-201ENST00000503717 318 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.73□□□□□ -1.49
RXRBP28702 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.73□□□□□ -1.49
RXRBP28702 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 Z84480.1-201ENST00000605131 311 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AP000654.2-201ENST00000605633 586 ntBASIC5.73□□□□□ -1.49
RXRBP28702 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.73□□□□□ -1.49
RXRBP28702 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RXRBP28702 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RXRBP28702 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.73□□□□□ -1.49
RXRBP28702 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.73□□□□□ -1.49
RXRBP28702 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RXRBP28702 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 AL512646.1-201ENST00000269395 1077 ntBASIC5.72□□□□□ -1.49
RXRBP28702 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 RN7SKP156-201ENST00000410308 342 ntBASIC5.72□□□□□ -1.49
RXRBP28702 RNU4-6P-201ENST00000410804 122 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.72□□□□□ -1.49
RXRBP28702 AC127526.1-201ENST00000417526 366 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms