Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CD40P25942 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.26□□□□□ -1.73
CD40P25942 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.26□□□□□ -1.73
CD40P25942 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.26□□□□□ -1.73
CD40P25942 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.26□□□□□ -1.73
CD40P25942 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD40P25942 AC011755.1-201ENST00000623763 2049 ntBASIC4.26□□□□□ -1.73
CD40P25942 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CD40P25942 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.26□□□□□ -1.73
CD40P25942 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 RPS4XP5-202ENST00000449995 1334 ntBASIC4.25□□□□□ -1.73
CD40P25942 AC092376.2-201ENST00000622621 4116 ntBASIC4.25□□□□□ -1.73
CD40P25942 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 SNORA73.1-201ENST00000363107 205 ntBASIC4.25□□□□□ -1.73
CD40P25942 SNORA51.2-201ENST00000364595 132 ntBASIC4.25□□□□□ -1.73
CD40P25942 Y_RNA.414-201ENST00000384011 101 ntBASIC4.25□□□□□ -1.73
CD40P25942 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 AL139039.1-201ENST00000401900 692 ntBASIC4.25□□□□□ -1.73
CD40P25942 RN7SKP140-201ENST00000411196 284 ntBASIC4.25□□□□□ -1.73
CD40P25942 USP9YP20-201ENST00000419224 558 ntBASIC4.25□□□□□ -1.73
CD40P25942 NCOR1P3-201ENST00000420479 303 ntBASIC4.25□□□□□ -1.73
CD40P25942 RWDD4P2-201ENST00000426392 563 ntBASIC4.25□□□□□ -1.73
CD40P25942 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AURKAPS2-201ENST00000454983 333 ntBASIC4.25□□□□□ -1.73
CD40P25942 RNU7-66P-201ENST00000459469 62 ntBASIC4.25□□□□□ -1.73
CD40P25942 RPL23AP56-201ENST00000460778 453 ntBASIC4.25□□□□□ -1.73
CD40P25942 TRBV1-201ENST00000476502 284 ntBASIC4.25□□□□□ -1.73
CD40P25942 AL049874.1-201ENST00000489560 388 ntBASIC4.25□□□□□ -1.73
CD40P25942 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.25□□□□□ -1.73
CD40P25942 AP001804.3-201ENST00000525146 880 ntBASIC4.25□□□□□ -1.73
CD40P25942 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 SNRPGP16-201ENST00000533275 226 ntBASIC4.25□□□□□ -1.73
CD40P25942 HPRT1P3-201ENST00000539521 576 ntBASIC4.25□□□□□ -1.73
CD40P25942 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.25□□□□□ -1.73
CD40P25942 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.25□□□□□ -1.73
CD40P25942 MIR4270-201ENST00000581799 70 ntBASIC4.25□□□□□ -1.73
CD40P25942 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 AL391358.1-201ENST00000605342 190 ntBASIC4.25□□□□□ -1.73
CD40P25942 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.25□□□□□ -1.73
CD40P25942 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 DUSP12P1-201ENST00000612874 516 ntBASIC4.25□□□□□ -1.73
CD40P25942 AC007742.2-201ENST00000618226 398 ntBASIC4.25□□□□□ -1.73
CD40P25942 AP003400.5-201ENST00000624827 617 ntBASIC4.25□□□□□ -1.73
CD40P25942 CR381572.2-201ENST00000624852 397 ntBASIC4.25□□□□□ -1.73
CD40P25942 AL133216.2-202ENST00000634512 349 ntBASIC4.25□□□□□ -1.73
CD40P25942 MTND5P42-201ENST00000637720 498 ntBASIC4.25□□□□□ -1.73
CD40P25942 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CD40P25942 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
CD40P25942 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD40P25942 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.25□□□□□ -1.73
CD40P25942 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.25□□□□□ -1.73
CD40P25942 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.25□□□□□ -1.73
CD40P25942 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 AC012618.3-205ENST00000637896 1496 ntBASIC4.24□□□□□ -1.73
CD40P25942 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.24□□□□□ -1.73
CD40P25942 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.24□□□□□ -1.73
CD40P25942 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40P25942 RNA5SP191-201ENST00000362585 102 ntBASIC4.24□□□□□ -1.73
CD40P25942 Y_RNA.67-201ENST00000362870 100 ntBASIC4.24□□□□□ -1.73
CD40P25942 RN7SKP115-201ENST00000363177 317 ntBASIC4.24□□□□□ -1.73
CD40P25942 RNU6-82P-201ENST00000363970 107 ntBASIC4.24□□□□□ -1.73
CD40P25942 Y_RNA.460-201ENST00000384255 102 ntBASIC4.24□□□□□ -1.73
CD40P25942 POLHP1-201ENST00000411806 470 ntBASIC4.24□□□□□ -1.73
CD40P25942 TBCAP2-201ENST00000416175 326 ntBASIC4.24□□□□□ -1.73
CD40P25942 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
CD40P25942 PDSS1P1-201ENST00000422953 1114 ntBASIC4.24□□□□□ -1.73
CD40P25942 HMGN2P27-201ENST00000427352 270 ntBASIC4.24□□□□□ -1.73
CD40P25942 FABP7P2-201ENST00000429946 379 ntBASIC4.24□□□□□ -1.73
CD40P25942 HMGB1P27-201ENST00000431429 603 ntBASIC4.24□□□□□ -1.73
CD40P25942 AL591212.2-201ENST00000433923 257 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms