Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU2-28P-201ENST00000410457 189 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.35□□□□□ -1.71
POLR2AP24928 SDCBPP2-201ENST00000424643 885 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 MTND4P19-201ENST00000446659 478 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.35□□□□□ -1.71
POLR2AP24928 S100A11P2-201ENST00000467589 312 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 MTND1P3-201ENST00000484956 952 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 RN7SL271P-201ENST00000487601 295 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.35□□□□□ -1.71
POLR2AP24928 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 CYCSP2-201ENST00000558168 301 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 AL845331.3-202ENST00000562856 261 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 MIR544B-201ENST00000582372 78 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 AC022432.1-201ENST00000595739 310 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 FER-210ENST00000628534 558 ntTSL 5 BASIC4.35□□□□□ -1.71
POLR2AP24928 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
POLR2AP24928 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 AL079305.1-201ENST00000623159 3008 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
POLR2AP24928 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 MAPK10-303ENST00000641324 3959 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
POLR2AP24928 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.35□□□□□ -1.71
POLR2AP24928 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 Y_RNA.162-201ENST00000363683 102 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 MIR320B1-201ENST00000390209 79 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AL590290.1-201ENST00000405336 380 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 OR9R1P-201ENST00000412200 877 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC007390.1-201ENST00000415722 356 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC005326.1-201ENST00000429197 123 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 RN7SL807P-201ENST00000470923 297 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.34□□□□□ -1.71
POLR2AP24928 RNA5SP208-201ENST00000516156 78 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 RNU7-30P-201ENST00000516835 62 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.34□□□□□ -1.71
POLR2AP24928 TPMTP1-201ENST00000592307 737 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC018926.3-201ENST00000618841 406 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC138965.3-201ENST00000623875 498 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.34□□□□□ -1.71
POLR2AP24928 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC093908.1-201ENST00000623125 8092 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 AL133383.2-201ENST00000622958 2336 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
POLR2AP24928 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 U3.26-201ENST00000391236 204 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 RNU6-510P-201ENST00000391239 108 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC104297.1-201ENST00000393779 870 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 NPM1P38-201ENST00000403835 865 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.34□□□□□ -1.71
POLR2AP24928 C1DP2-201ENST00000418167 426 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 BTF3L4P3-201ENST00000418879 476 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC092809.1-201ENST00000441469 474 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 FTH1P25-201ENST00000447665 469 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 EIF4A1P11-201ENST00000451239 222 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 RPL23AP71-201ENST00000470966 469 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC084198.1-201ENST00000477747 402 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
POLR2AP24928 AC117522.3-201ENST00000507974 584 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 FGF7P4-201ENST00000509595 295 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 RNU6-513P-201ENST00000516104 104 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC022884.3-201ENST00000579571 248 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.34□□□□□ -1.71
POLR2AP24928 AC243960.4-201ENST00000600532 288 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AP000942.4-201ENST00000604811 241 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.34□□□□□ -1.71
POLR2AP24928 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC110801.1-201ENST00000623590 212 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 AC009161.2-201ENST00000624626 138 ntBASIC4.34□□□□□ -1.71
POLR2AP24928 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
POLR2AP24928 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
POLR2AP24928 AC007529.1-201ENST00000418574 2178 ntBASIC4.34□□□□□ -1.72
POLR2AP24928 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms