Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 OR4H12P-201ENST00000556269 907 ntBASIC3.83□□□□□ -1.8
BDNFP23560 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
BDNFP23560 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.83□□□□□ -1.8
BDNFP23560 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.83□□□□□ -1.8
BDNFP23560 DUXAP4-201ENST00000603046 613 ntBASIC3.83□□□□□ -1.8
BDNFP23560 AC024220.1-201ENST00000603675 484 ntBASIC3.83□□□□□ -1.8
BDNFP23560 AL357094.1-201ENST00000603845 844 ntBASIC3.83□□□□□ -1.8
BDNFP23560 AC013553.2-201ENST00000604244 589 ntBASIC3.83□□□□□ -1.8
BDNFP23560 AC013470.4-201ENST00000619978 986 ntBASIC3.83□□□□□ -1.8
BDNFP23560 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.83□□□□□ -1.8
BDNFP23560 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
BDNFP23560 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BDNFP23560 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.83□□□□□ -1.8
BDNFP23560 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BDNFP23560 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.83□□□□□ -1.8
BDNFP23560 AL138713.1-201ENST00000624026 2130 ntBASIC3.83□□□□□ -1.8
BDNFP23560 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BDNFP23560 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BDNFP23560 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BDNFP23560 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BDNFP23560 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.82□□□□□ -1.8
BDNFP23560 MIR218-2-201ENST00000385006 110 ntBASIC3.82□□□□□ -1.8
BDNFP23560 HSPE1P8-201ENST00000406997 288 ntBASIC3.82□□□□□ -1.8
BDNFP23560 Z85995.1-201ENST00000415547 335 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC068533.1-201ENST00000418542 415 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.82□□□□□ -1.8
BDNFP23560 TRIM60P18-201ENST00000441518 828 ntBASIC3.82□□□□□ -1.8
BDNFP23560 CBWD4P-201ENST00000445695 655 ntBASIC3.82□□□□□ -1.8
BDNFP23560 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.82□□□□□ -1.8
BDNFP23560 RSL24D1P3-201ENST00000449255 495 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.82□□□□□ -1.8
BDNFP23560 AC106872.3-201ENST00000495104 446 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC021146.8-201ENST00000507455 733 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.82□□□□□ -1.8
BDNFP23560 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.82□□□□□ -1.8
BDNFP23560 OR5B10P-201ENST00000532869 642 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC004024.1-201ENST00000549244 247 ntBASIC3.82□□□□□ -1.8
BDNFP23560 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.82□□□□□ -1.8
BDNFP23560 MTND4P33-201ENST00000556706 766 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.82□□□□□ -1.8
BDNFP23560 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.82□□□□□ -1.8
BDNFP23560 AL161729.4-201ENST00000604650 476 ntBASIC3.82□□□□□ -1.8
BDNFP23560 U3.45-201ENST00000607547 219 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC007349.4-201ENST00000608114 532 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC244100.1-202ENST00000621554 382 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AP002782.1-201ENST00000623107 614 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC068880.5-201ENST00000624331 290 ntBASIC3.82□□□□□ -1.8
BDNFP23560 AC006504.1-201ENST00000562493 3666 ntBASIC3.82□□□□□ -1.8
BDNFP23560 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.82□□□□□ -1.8
BDNFP23560 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
BDNFP23560 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BDNFP23560 SRP72P2-201ENST00000344851 1979 ntBASIC3.82□□□□□ -1.8
BDNFP23560 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
BDNFP23560 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 RNU6-853P-201ENST00000364306 107 ntBASIC3.81□□□□□ -1.8
BDNFP23560 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
BDNFP23560 TXNP7-201ENST00000406296 293 ntBASIC3.81□□□□□ -1.8
BDNFP23560 HMGN1P24-201ENST00000412282 298 ntBASIC3.81□□□□□ -1.8
BDNFP23560 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.81□□□□□ -1.8
BDNFP23560 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC073063.1-201ENST00000434352 607 ntBASIC3.81□□□□□ -1.8
BDNFP23560 RPL21P23-201ENST00000446654 460 ntBASIC3.81□□□□□ -1.8
BDNFP23560 EEF1E1P1-201ENST00000446998 430 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.81□□□□□ -1.8
BDNFP23560 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 AP002884.2-201ENST00000471647 395 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.81□□□□□ -1.8
BDNFP23560 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.81□□□□□ -1.8
BDNFP23560 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.81□□□□□ -1.8
BDNFP23560 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.81□□□□□ -1.8
BDNFP23560 AC110768.1-201ENST00000509222 400 ntBASIC3.81□□□□□ -1.8
BDNFP23560 CDC42P4-201ENST00000510507 563 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC034159.1-201ENST00000513885 583 ntBASIC3.81□□□□□ -1.8
BDNFP23560 MTND5P4-201ENST00000514978 288 ntBASIC3.81□□□□□ -1.8
BDNFP23560 RNU6-311P-201ENST00000516224 102 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC105185.1-201ENST00000518705 535 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AP002748.2-201ENST00000528671 348 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC068587.4-201ENST00000533893 186 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.81□□□□□ -1.8
BDNFP23560 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.81□□□□□ -1.8
BDNFP23560 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.81□□□□□ -1.8
BDNFP23560 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
BDNFP23560 AL136363.1-201ENST00000605349 337 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AC093838.1-201ENST00000613014 469 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AL732618.1-201ENST00000623251 301 ntBASIC3.81□□□□□ -1.8
BDNFP23560 AP000676.4-201ENST00000624659 623 ntBASIC3.81□□□□□ -1.8
BDNFP23560 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BDNFP23560 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BDNFP23560 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.8□□□□□ -1.8
BDNFP23560 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BDNFP23560 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
BDNFP23560 MIR7-3-201ENST00000384898 110 ntBASIC3.8□□□□□ -1.8
BDNFP23560 RNA5SP354-201ENST00000391247 136 ntBASIC3.8□□□□□ -1.8
BDNFP23560 RN7SKP56-201ENST00000410513 331 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.8□□□□□ -1.8
BDNFP23560 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms