Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RNA5SP345-201ENST00000410646 108 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 AC114755.2-201ENST00000413520 361 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 VN1R36P-201ENST00000414936 291 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 NDUFB4P5-201ENST00000415445 361 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.21□□□□□ -1.74
NR4A1P22736 MTCO2P27-201ENST00000420740 428 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 HSPE1P1-201ENST00000421494 318 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 NANOGP10-201ENST00000453325 895 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.21□□□□□ -1.74
NR4A1P22736 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 Y_RNA.639-201ENST00000458981 102 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 AC006512.1-201ENST00000468816 291 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 AC093853.1-201ENST00000515689 483 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 snoU109.6-201ENST00000516831 118 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 IGLVIV-53-201ENST00000520107 367 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.21□□□□□ -1.74
NR4A1P22736 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.21□□□□□ -1.74
NR4A1P22736 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.21□□□□□ -1.74
NR4A1P22736 NCAPGP2-201ENST00000557911 754 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 MIR4737-201ENST00000583979 81 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 AC011978.2-201ENST00000569835 2054 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR4A1P22736 AC004972.1-201ENST00000623934 2209 ntBASIC4.21□□□□□ -1.74
NR4A1P22736 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.21□□□□□ -1.74
NR4A1P22736 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NR4A1P22736 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 ZNF962P-201ENST00000443465 3140 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 Y_RNA.202-201ENST00000364083 110 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 Y_RNA.259-201ENST00000364619 101 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 MIR454-201ENST00000390180 115 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 SSXP10-201ENST00000402595 565 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 RNA5SP113-201ENST00000410486 84 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC069218.2-201ENST00000411665 344 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 BEND7P1-201ENST00000422058 457 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.2□□□□□ -1.74
NR4A1P22736 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.2□□□□□ -1.74
NR4A1P22736 OR4K11P-201ENST00000431829 904 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.2□□□□□ -1.74
NR4A1P22736 AURKAPS2-201ENST00000454983 333 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 PLGLA-201ENST00000465668 449 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC025445.1-201ENST00000502728 300 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC018552.1-201ENST00000562099 811 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC026464.5-201ENST00000562497 722 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 SULT1C2P2-201ENST00000562517 294 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 OR4K8P-201ENST00000578842 1048 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 MIR3667-201ENST00000581025 74 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC093838.1-201ENST00000613014 469 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC100827.5-201ENST00000615883 426 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 AC091953.3-201ENST00000623220 236 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AL159972.1-201ENST00000625150 448 ntBASIC4.2□□□□□ -1.74
NR4A1P22736 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.2□□□□□ -1.74
NR4A1P22736 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.2□□□□□ -1.74
NR4A1P22736 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NR4A1P22736 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.2□□□□□ -1.74
NR4A1P22736 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NR4A1P22736 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NR4A1P22736 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NR4A1P22736 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
NR4A1P22736 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.19□□□□□ -1.74
NR4A1P22736 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NR4A1P22736 OR1S2-201ENST00000302592 978 ntBASIC4.19□□□□□ -1.74
NR4A1P22736 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NR4A1P22736 Y_RNA.132-201ENST00000363421 102 ntBASIC4.19□□□□□ -1.74
NR4A1P22736 RNU5A-8P-201ENST00000364102 114 ntBASIC4.19□□□□□ -1.74
NR4A1P22736 RNY3P13-201ENST00000365542 102 ntBASIC4.19□□□□□ -1.74
NR4A1P22736 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
NR4A1P22736 RNU6-1293P-201ENST00000384077 107 ntBASIC4.19□□□□□ -1.74
NR4A1P22736 RNA5SP87-201ENST00000384155 118 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms