Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.56□□□□□ -1.84
CDH1P12830 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 Y_RNA.126-201ENST00000363382 111 ntBASIC3.56□□□□□ -1.84
CDH1P12830 RNU6-744P-201ENST00000365557 107 ntBASIC3.56□□□□□ -1.84
CDH1P12830 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 RNU6-533P-201ENST00000384144 107 ntBASIC3.56□□□□□ -1.84
CDH1P12830 RNU6-1316P-201ENST00000384242 108 ntBASIC3.56□□□□□ -1.84
CDH1P12830 U8.11-201ENST00000384699 133 ntBASIC3.56□□□□□ -1.84
CDH1P12830 U8.12-201ENST00000384701 133 ntBASIC3.56□□□□□ -1.84
CDH1P12830 CYCSP19-201ENST00000411715 316 ntBASIC3.56□□□□□ -1.84
CDH1P12830 RPL31P45-201ENST00000419532 356 ntBASIC3.56□□□□□ -1.84
CDH1P12830 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 PSMA6P3-201ENST00000428242 164 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH1P12830 PGBD4P3-201ENST00000440731 581 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH1P12830 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 PDSS1P2-201ENST00000449397 678 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AL590365.1-201ENST00000450788 243 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH1P12830 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH1P12830 U8.18-201ENST00000459285 133 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC104563.1-201ENST00000476147 376 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LARP1BP2-201ENST00000486594 519 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH1P12830 OR5H5P-201ENST00000503164 928 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 ARL2BPP6-201ENST00000512757 439 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH1P12830 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AP003392.2-201ENST00000527269 208 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC022878.1-201ENST00000530684 149 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH1P12830 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH1P12830 AC009063.1-201ENST00000563342 702 ntBASIC3.56□□□□□ -1.84
CDH1P12830 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH1P12830 AC053481.3-201ENST00000577881 843 ntBASIC3.56□□□□□ -1.84
CDH1P12830 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH1P12830 OR4G1P-201ENST00000588632 938 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 AC112191.3-201ENST00000604371 277 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AL365503.1-201ENST00000605247 905 ntBASIC3.56□□□□□ -1.84
CDH1P12830 RNU1-30P-201ENST00000606575 163 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC131902.3-201ENST00000611767 581 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC008498.1-201ENST00000613012 531 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
CDH1P12830 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH1P12830 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 NUP58P1-201ENST00000502546 1738 ntBASIC3.56□□□□□ -1.84
CDH1P12830 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH1P12830 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH1P12830 AL049780.3-201ENST00000624612 1583 ntBASIC3.55□□□□□ -1.84
CDH1P12830 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CDH1P12830 CCT4P2-201ENST00000233836 1548 ntBASIC3.55□□□□□ -1.84
CDH1P12830 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH1P12830 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH1P12830 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH1P12830 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CDH1P12830 Y_RNA.516-201ENST00000384541 124 ntBASIC3.55□□□□□ -1.84
CDH1P12830 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH1P12830 ELOCP17-201ENST00000414751 326 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH1P12830 MTATP6P27-201ENST00000416987 621 ntBASIC3.55□□□□□ -1.84
CDH1P12830 USP9YP13-201ENST00000417797 480 ntBASIC3.55□□□□□ -1.84
CDH1P12830 RPL36AP36-201ENST00000418616 301 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AIMP1P1-201ENST00000418670 937 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC104651.1-201ENST00000427559 735 ntBASIC3.55□□□□□ -1.84
CDH1P12830 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH1P12830 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
CDH1P12830 MTCYBP45-201ENST00000435243 565 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC091862.1-201ENST00000438016 1100 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC244505.5-201ENST00000443639 207 ntBASIC3.55□□□□□ -1.84
CDH1P12830 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH1P12830 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH1P12830 AL033528.1-201ENST00000453780 140 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AP001992.1-205ENST00000462248 379 ntBASIC3.55□□□□□ -1.84
CDH1P12830 SRRM1P2-201ENST00000464531 1192 ntBASIC3.55□□□□□ -1.84
CDH1P12830 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH1P12830 AC087312.1-201ENST00000471411 480 ntBASIC3.55□□□□□ -1.84
CDH1P12830 RPS3AP50-201ENST00000487064 803 ntBASIC3.55□□□□□ -1.84
CDH1P12830 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH1P12830 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
CDH1P12830 MTCO3P44-201ENST00000510977 541 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC093677.1-201ENST00000514414 678 ntBASIC3.55□□□□□ -1.84
CDH1P12830 HIGD1AP3-201ENST00000515857 278 ntBASIC3.55□□□□□ -1.84
CDH1P12830 PTP4A1P6-201ENST00000531034 478 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH1P12830 AL161713.1-201ENST00000555538 145 ntBASIC3.55□□□□□ -1.84
CDH1P12830 AC245505.1-201ENST00000556398 224 ntBASIC3.55□□□□□ -1.84
CDH1P12830 MIR4458-201ENST00000578872 75 ntBASIC3.55□□□□□ -1.84
CDH1P12830 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms