Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC023128.2-201ENST00000420880 1223 ntBASIC2.82□□□□□ -1.96
TOP2AP11388 DPPA3P1-201ENST00000448050 469 ntBASIC2.82□□□□□ -1.96
TOP2AP11388 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.82□□□□□ -1.96
TOP2AP11388 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.82□□□□□ -1.96
TOP2AP11388 RPL23AP78-201ENST00000599928 470 ntBASIC2.82□□□□□ -1.96
TOP2AP11388 AC011890.2-201ENST00000613393 294 ntBASIC2.82□□□□□ -1.96
TOP2AP11388 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.81□□□□□ -1.96
TOP2AP11388 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TOP2AP11388 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 RNU6-60P-201ENST00000364792 103 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 Y_RNA.355-201ENST00000365462 98 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.81□□□□□ -1.96
TOP2AP11388 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.81□□□□□ -1.96
TOP2AP11388 MIR3618-201ENST00000580330 88 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 AP001029.3-201ENST00000588063 596 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 AP001542.2-201ENST00000593141 364 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 AC098679.5-201ENST00000624394 571 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 AC007256.1-201ENST00000392253 2765 ntBASIC2.81□□□□□ -1.96
TOP2AP11388 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TOP2AP11388 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TOP2AP11388 XKRYP4-201ENST00000414395 483 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 AL009174.1-201ENST00000426577 416 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 XKRYP5-201ENST00000449659 483 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 AC093392.2-201ENST00000450682 337 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 IGLV3-17-201ENST00000519099 244 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.8□□□□□ -1.96
TOP2AP11388 AL161670.1-201ENST00000554348 137 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 RMST_6.1-201ENST00000611980 203 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.8□□□□□ -1.96
TOP2AP11388 Y_RNA.116-201ENST00000363292 103 ntBASIC2.79□□□□□ -1.96
TOP2AP11388 AC092638.1-201ENST00000411966 1275 ntBASIC2.79□□□□□ -1.96
TOP2AP11388 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP2AP11388 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP2AP11388 AC021146.7-201ENST00000509604 775 ntBASIC2.79□□□□□ -1.96
TOP2AP11388 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.79□□□□□ -1.96
TOP2AP11388 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP2AP11388 AC005156.1-201ENST00000613371 573 ntBASIC2.79□□□□□ -1.96
TOP2AP11388 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TOP2AP11388 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TOP2AP11388 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TOP2AP11388 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TOP2AP11388 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TOP2AP11388 HMGB3P2-201ENST00000411913 584 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 RPS3AP9-201ENST00000417027 792 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 PAICSP7-201ENST00000419829 962 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP2AP11388 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.78□□□□□ -1.96
TOP2AP11388 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 AC104115.2-201ENST00000523026 687 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP2AP11388 ZNF192P1-203ENST00000565888 810 ntBASIC2.78□□□□□ -1.96
TOP2AP11388 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TOP2AP11388 AL391987.6-201ENST00000305671 199 ntBASIC2.78□□□□□ -1.97
TOP2AP11388 Y_RNA.466-201ENST00000384294 113 ntBASIC2.78□□□□□ -1.97
TOP2AP11388 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.78□□□□□ -1.97
TOP2AP11388 AL031659.1-201ENST00000447075 539 ntBASIC2.78□□□□□ -1.97
TOP2AP11388 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
TOP2AP11388 AC015720.1-201ENST00000565251 277 ntBASIC2.78□□□□□ -1.97
TOP2AP11388 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.78□□□□□ -1.97
TOP2AP11388 MIR3935-201ENST00000583472 104 ntBASIC2.78□□□□□ -1.97
TOP2AP11388 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TOP2AP11388 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.77□□□□□ -1.97
TOP2AP11388 AL353093.1-201ENST00000441292 436 ntBASIC2.77□□□□□ -1.97
TOP2AP11388 AC073901.1-201ENST00000462471 408 ntBASIC2.77□□□□□ -1.97
TOP2AP11388 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.77□□□□□ -1.97
TOP2AP11388 AC084851.1-201ENST00000529105 249 ntBASIC2.77□□□□□ -1.97
TOP2AP11388 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.77□□□□□ -1.97
TOP2AP11388 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TOP2AP11388 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TOP2AP11388 RNU6-53P-201ENST00000365367 106 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TOP2AP11388 RNA5SP489-201ENST00000410986 109 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 MTND2P16-201ENST00000419987 799 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.76□□□□□ -1.97
TOP2AP11388 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.76□□□□□ -1.97
TOP2AP11388 SNRPFP4-201ENST00000456366 242 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 AC092798.1-201ENST00000458542 409 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 RPS15AP36-201ENST00000492022 382 ntBASIC2.76□□□□□ -1.97
TOP2AP11388 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TOP2AP11388 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.76□□□□□ -1.97
TOP2AP11388 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
TOP2AP11388 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TOP2AP11388 RNU1-42P-201ENST00000364033 160 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AC009237.2-201ENST00000421358 284 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.75□□□□□ -1.97
TOP2AP11388 TVP23BP2-201ENST00000455082 615 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.75□□□□□ -1.97
TOP2AP11388 AC087441.2-201ENST00000529141 262 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AC098848.2-201ENST00000588023 330 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 WISP1-OT1-201ENST00000602893 642 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AL133393.1-201ENST00000603277 287 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AL049779.4-201ENST00000604500 156 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 AC011978.2-201ENST00000569835 2054 ntBASIC2.75□□□□□ -1.97
TOP2AP11388 RNU2-37P-201ENST00000410695 177 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 RPS7P2-201ENST00000435134 607 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.74□□□□□ -1.97
TOP2AP11388 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP2AP11388 AP004242.1-201ENST00000533701 349 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms