Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNU5E-8P-201ENST00000363502 116 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNA5SP509-201ENST00000364577 119 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RPL34P6-201ENST00000432390 345 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RPS17P8-201ENST00000434525 335 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 DDX3P2-201ENST00000446138 111 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RPS24P6-201ENST00000452670 400 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RPL7AP28-201ENST00000464513 571 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 HIGD1AP3-201ENST00000515857 278 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 SNORD116-26-201ENST00000516006 96 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-1088P-201ENST00000516850 104 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-798P-201ENST00000516912 103 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-273P-201ENST00000516937 96 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC011979.2-201ENST00000527568 352 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC107918.3-201ENST00000533272 382 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 SNORA74C-1-201ENST00000580726 201 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 AL355812.1-201ENST00000603215 216 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CSB-PGBD3P0DP91 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 Z95331.1-201ENST00000623075 23112 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 TLK1P1-201ENST00000456760 2440 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 SET-203ENST00000372688 801 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-38P-201ENST00000384085 107 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-333P-201ENST00000459117 107 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 RNU7-66P-201ENST00000459469 62 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC091885.1-201ENST00000506658 268 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 MTCYBP40-201ENST00000509390 1135 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC098591.2-201ENST00000510152 315 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC016559.2-201ENST00000510759 359 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC007016.1-201ENST00000512110 244 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 MYL12AP1-201ENST00000518490 515 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC009902.1-201ENST00000519351 183 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 RPL21P12-201ENST00000559810 515 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 MIR3160-1-201ENST00000577972 85 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC083806.3-201ENST00000614016 455 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 AC002525.1-201ENST00000624392 1622 ntBASIC6.36□□□□□ -1.39
CSB-PGBD3P0DP91 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 PABPC1P7-201ENST00000413177 1513 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL450326.2-201ENST00000421913 1962 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms