Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 AC004067.1-201ENST00000608733 700 ntBASIC4.71□□□□□ -1.66
SNRPA1P09661 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.71□□□□□ -1.66
SNRPA1P09661 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.71□□□□□ -1.66
SNRPA1P09661 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.71□□□□□ -1.66
SNRPA1P09661 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 AL365440.1-201ENST00000436135 2167 ntBASIC4.71□□□□□ -1.66
SNRPA1P09661 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SNRPA1P09661 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNRPA1P09661 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 LINC01355-201ENST00000566551 5444 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AC090337.1-201ENST00000579651 2074 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SNRPA1P09661 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 U8.3-201ENST00000363321 132 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 RNU6-780P-201ENST00000391030 104 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 MTCO3P40-201ENST00000392516 676 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 CALM2P3-201ENST00000400429 449 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AL031679.1-201ENST00000400616 525 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 MIR1277-201ENST00000408536 78 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 RPS7P15-201ENST00000415804 584 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 ISCA1P6-201ENST00000427740 390 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AC087650.1-201ENST00000431445 468 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AC000111.3-201ENST00000433478 193 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 RPL23AP83-201ENST00000434984 473 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 RPL22P17-201ENST00000438729 315 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AP000542.1-201ENST00000448473 371 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AP000893.1-201ENST00000474462 794 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 TRBV12-2-201ENST00000489763 344 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AC090453.1-201ENST00000495560 436 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 PTGES3P3-201ENST00000511479 482 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 RNU2-46P-201ENST00000517038 113 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AC118273.2-201ENST00000532092 465 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AC007458.1-201ENST00000542812 373 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
SNRPA1P09661 AP000907.4-201ENST00000604143 237 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 FARSBP1-201ENST00000435808 1778 ntBASIC4.7□□□□□ -1.66
SNRPA1P09661 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
SNRPA1P09661 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNRPA1P09661 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNRPA1P09661 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNRPA1P09661 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.69□□□□□ -1.66
SNRPA1P09661 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNRPA1P09661 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNRPA1P09661 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNRPA1P09661 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.69□□□□□ -1.66
SNRPA1P09661 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNRPA1P09661 CCT4P2-201ENST00000233836 1548 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 Y_RNA.9-201ENST00000362354 101 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.69□□□□□ -1.66
SNRPA1P09661 SNORA9-201ENST00000384215 133 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 RNVU1-14-201ENST00000384770 164 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 MIR490-201ENST00000384865 128 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 RPS20P2-201ENST00000402520 389 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 RNA5SP306-201ENST00000411087 107 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 MTCO1P17-201ENST00000411522 491 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 MTCYBP24-201ENST00000420387 1106 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.69□□□□□ -1.66
SNRPA1P09661 HMGB1P31-201ENST00000437242 427 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 AL121601.2-201ENST00000438019 707 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 RBMY2UP-201ENST00000453474 324 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC087879.1-201ENST00000474343 374 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 RPS3AP14-201ENST00000483907 780 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 FCF1P3-201ENST00000496394 590 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.69□□□□□ -1.66
SNRPA1P09661 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AC103843.2-201ENST00000530523 682 ntBASIC4.69□□□□□ -1.66
SNRPA1P09661 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.69□□□□□ -1.66
SNRPA1P09661 AL121579.1-201ENST00000555129 305 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms