Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MTND4LP20-201ENST00000402379 270 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL355994.1-201ENST00000424379 260 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 RPS6P14-201ENST00000425165 719 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL590623.1-201ENST00000427864 105 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC079780.1-201ENST00000428259 207 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC236972.1-201ENST00000433225 199 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 TPTE2P1-204ENST00000435256 593 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 RPS26P30-201ENST00000443431 335 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 BX248409.1-201ENST00000455497 255 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC128713.1-201ENST00000471495 306 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC087241.2-201ENST00000535801 324 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AL590396.2-201ENST00000636511 1041 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RPL21P132-201ENST00000331267 462 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RNA5SP27-201ENST00000363839 119 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RNU6-921P-201ENST00000384361 107 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 BTF3P7-201ENST00000407097 488 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RNU6-712P-201ENST00000410558 100 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC009237.2-201ENST00000421358 284 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RPP40P1-201ENST00000426762 456 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 MTCYBP34-201ENST00000439552 670 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC004022.1-201ENST00000447766 1066 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AL109741.2-201ENST00000455561 343 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RNA5SP310-201ENST00000459084 116 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 RPL23AP49-201ENST00000492925 468 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 MTND3P24-201ENST00000506306 329 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC009901.1-201ENST00000506703 541 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 SNRPGP16-201ENST00000533275 226 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 OR8K4P-201ENST00000534608 872 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 DUXAP3-201ENST00000603616 594 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC073968.1-201ENST00000618594 637 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 AL121594.5-201ENST00000631724 573 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
HLA-DQB2P05538 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.28□□□□□ -2.04
HLA-DQB2P05538 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
HLA-DQB2P05538 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC008432.1-201ENST00000615912 1320 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 NACA3P-201ENST00000359690 648 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 RNU6-799P-201ENST00000363567 107 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 RNU4-53P-201ENST00000410828 140 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 ATP5F1P1-201ENST00000433775 569 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 SNORA59A-201ENST00000459326 152 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 CABYRP1-201ENST00000465493 1045 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC126177.3-201ENST00000551839 688 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC025918.2-201ENST00000558683 763 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AP001330.4-201ENST00000604350 154 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC104237.2-201ENST00000612456 443 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC068722.2-201ENST00000618734 544 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC002064.3-201ENST00000623448 346 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 MTND5P6-201ENST00000422338 1798 ntBASIC2.27□□□□□ -2.05
HLA-DQB2P05538 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQB2P05538 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms