Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.12□□□□□ -1.91
MT-ND1P03886 RNU7-136P-201ENST00000458819 69 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.12□□□□□ -1.91
MT-ND1P03886 RNU6-232P-201ENST00000517144 64 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MT-ND1P03886 SETP7-201ENST00000552169 453 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 AP005205.1-201ENST00000563503 508 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 MIR4697-201ENST00000582977 78 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC090616.2-202ENST00000584248 222 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 SNORA51-201ENST00000606420 132 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AL392048.1-201ENST00000613946 534 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 MIR6810-201ENST00000622701 70 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 AL079343.1-201ENST00000572358 1771 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MT-ND1P03886 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MT-ND1P03886 OR4G11P-202ENST00000642116 1414 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
MT-ND1P03886 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.11□□□□□ -1.91
MT-ND1P03886 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MT-ND1P03886 RNU6-1155P-201ENST00000363554 107 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MT-ND1P03886 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.11□□□□□ -1.91
MT-ND1P03886 RNU6-952P-201ENST00000391164 108 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 RN7SKP159-201ENST00000410657 292 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC007899.1-201ENST00000412776 775 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC245052.5-201ENST00000416320 649 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.11□□□□□ -1.91
MT-ND1P03886 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.11□□□□□ -1.91
MT-ND1P03886 AL365203.2-201ENST00000423444 196 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 ZYG11AP1-201ENST00000430329 837 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 MUPP-201ENST00000438111 566 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.11□□□□□ -1.91
MT-ND1P03886 AC005297.2-201ENST00000450430 606 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 MTCO3P11-201ENST00000455103 774 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 SUMO2P2-201ENST00000456482 255 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 RPS3AP43-201ENST00000479743 781 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC104685.1-201ENST00000502445 371 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 KCTD9P5-201ENST00000504141 1170 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.11□□□□□ -1.91
MT-ND1P03886 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
MT-ND1P03886 MTCYBP43-201ENST00000513621 740 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 RNU6-150P-201ENST00000516237 95 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 RNU6-711P-201ENST00000517255 106 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 IGHV3-76-201ENST00000522465 295 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
MT-ND1P03886 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.11□□□□□ -1.91
MT-ND1P03886 AC084824.1-201ENST00000550917 1005 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 MED28P6-201ENST00000558776 231 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.11□□□□□ -1.91
MT-ND1P03886 VN1R92P-201ENST00000598511 928 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC006557.5-201ENST00000603126 811 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AL596327.1-201ENST00000603629 213 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AP000811.1-201ENST00000603803 651 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 BNIP3P11-201ENST00000603878 563 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC025588.4-201ENST00000615802 908 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AL603755.1-201ENST00000619504 163 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.11□□□□□ -1.91
MT-ND1P03886 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
MT-ND1P03886 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MT-ND1P03886 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MT-ND1P03886 AC087359.1-201ENST00000508335 1740 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
MT-ND1P03886 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 RNU6-777P-201ENST00000364265 104 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 RNU6-343P-201ENST00000364709 104 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MT-ND1P03886 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 SNORA57.1-201ENST00000391227 145 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL136372.1-201ENST00000403060 228 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 HMGB1P17-201ENST00000403495 628 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 RN7SKP111-201ENST00000410349 271 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 MTND4P20-201ENST00000424125 869 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.1□□□□□ -1.91
MT-ND1P03886 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL121871.1-201ENST00000443413 436 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 MTND2P22-201ENST00000444325 1033 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL359073.1-201ENST00000448036 403 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.1□□□□□ -1.91
MT-ND1P03886 RPL36AP33-201ENST00000450395 310 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.1□□□□□ -1.91
MT-ND1P03886 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.1□□□□□ -1.91
MT-ND1P03886 BZW1P2-201ENST00000473537 826 ntBASIC3.1□□□□□ -1.91
MT-ND1P03886 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms