Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFBP01127 HSPA8P13-201ENST00000523715 472 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFBP01127 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 HIGD1AP17-201ENST00000554576 276 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFBP01127 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.33□□□□□ -1.88
PDGFBP01127 MIR4637-201ENST00000582405 84 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.33□□□□□ -1.88
PDGFBP01127 BNIP3P26-201ENST00000600827 554 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC234772.3-201ENST00000602277 528 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC009220.3-201ENST00000604318 586 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC012443.1-201ENST00000605605 231 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC080013.3-201ENST00000606839 578 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC009159.2-201ENST00000617603 606 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PDGFBP01127 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
PDGFBP01127 RPS4XP5-202ENST00000449995 1334 ntBASIC3.33□□□□□ -1.88
PDGFBP01127 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFBP01127 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AL008987.1-201ENST00000415528 237 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 COX7BP2-201ENST00000437976 242 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFBP01127 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFBP01127 RPL36AP33-201ENST00000450395 310 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC108938.1-201ENST00000451204 136 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFBP01127 MTND1P16-201ENST00000465177 898 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFBP01127 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC114981.1-201ENST00000503897 678 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC021146.8-201ENST00000507455 733 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 RN7SKP31-201ENST00000516354 278 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC005832.3-201ENST00000537929 631 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 CR383656.7-201ENST00000548164 174 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 MTND4P33-201ENST00000556706 766 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 MED28P6-201ENST00000558776 231 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AL133457.1-201ENST00000564251 987 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFBP01127 MTATP6P24-201ENST00000576835 677 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC061975.8-201ENST00000587058 721 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 AL365503.1-201ENST00000605247 905 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC007349.4-201ENST00000608114 532 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AL451074.6-201ENST00000608512 729 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC079395.3-201ENST00000615161 484 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC004009.2-201ENST00000623016 728 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AC120349.2-201ENST00000625002 298 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 AC008993.2-201ENST00000631744 806 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 CRYM-AS1-204ENST00000637983 556 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 MIR1322-201ENST00000638013 71 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 AL513185.3-201ENST00000433335 1300 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFBP01127 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.32□□□□□ -1.88
PDGFBP01127 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFBP01127 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PDGFBP01127 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
PDGFBP01127 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFBP01127 RIOK3P1-201ENST00000418778 1528 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFBP01127 SNRPEP3-201ENST00000338402 276 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 ZYG11AP1-201ENST00000430329 837 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 MTND2P20-201ENST00000440805 661 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.31□□□□□ -1.88
PDGFBP01127 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFBP01127 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 MTCO3P11-201ENST00000455103 774 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 RPS29P26-201ENST00000477483 171 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.31□□□□□ -1.88
PDGFBP01127 YWHAEP4-201ENST00000505390 198 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 AC114322.1-201ENST00000506771 926 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms