Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC006378.2-201ENST00000623178 2476 ntBASIC3.13□□□□□ -1.91
PCF11O94913 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.13□□□□□ -1.91
PCF11O94913 RNA5SP295-201ENST00000362655 121 ntBASIC3.12□□□□□ -1.91
PCF11O94913 RNU2-68P-201ENST00000410878 191 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
PCF11O94913 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.12□□□□□ -1.91
PCF11O94913 AC010735.1-201ENST00000567305 1026 ntBASIC3.12□□□□□ -1.91
PCF11O94913 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 AL356280.1-201ENST00000603614 379 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC011468.4-201ENST00000603942 409 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 AC092650.2-201ENST00000619984 902 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC091953.2-201ENST00000623979 160 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC010872.1-201ENST00000624225 675 ntBASIC3.12□□□□□ -1.91
PCF11O94913 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCF11O94913 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.12□□□□□ -1.91
PCF11O94913 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 NEK4P1-201ENST00000433383 879 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.12□□□□□ -1.91
PCF11O94913 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 RPL23AP7-203ENST00000449021 469 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AP000852.1-201ENST00000472460 573 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 snoZ278.1-201ENST00000517059 112 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.12□□□□□ -1.91
PCF11O94913 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.12□□□□□ -1.91
PCF11O94913 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.12□□□□□ -1.91
PCF11O94913 APOOP1-201ENST00000604695 592 ntBASIC3.12□□□□□ -1.91
PCF11O94913 AC008173.1-201ENST00000418901 264 ntBASIC3.11□□□□□ -1.91
PCF11O94913 AC073310.1-201ENST00000423226 1033 ntBASIC3.11□□□□□ -1.91
PCF11O94913 AC108120.2-201ENST00000512973 294 ntBASIC3.11□□□□□ -1.91
PCF11O94913 HMGB1P1-201ENST00000522557 636 ntBASIC3.11□□□□□ -1.91
PCF11O94913 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PCF11O94913 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.11□□□□□ -1.91
PCF11O94913 MTCO2P22-201ENST00000603246 681 ntBASIC3.11□□□□□ -1.91
PCF11O94913 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.11□□□□□ -1.91
PCF11O94913 AC055764.2-201ENST00000610089 670 ntBASIC3.11□□□□□ -1.91
PCF11O94913 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.11□□□□□ -1.91
PCF11O94913 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.11□□□□□ -1.91
PCF11O94913 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PCF11O94913 MTND5P3-201ENST00000438536 1800 ntBASIC3.1□□□□□ -1.91
PCF11O94913 RNU1-57P-201ENST00000384491 166 ntBASIC3.1□□□□□ -1.91
PCF11O94913 MIR591-201ENST00000385290 95 ntBASIC3.1□□□□□ -1.91
PCF11O94913 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.1□□□□□ -1.91
PCF11O94913 RPL31P20-201ENST00000449593 360 ntBASIC3.1□□□□□ -1.91
PCF11O94913 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.1□□□□□ -1.91
PCF11O94913 RPL31P53-201ENST00000457065 348 ntBASIC3.1□□□□□ -1.91
PCF11O94913 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCF11O94913 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
PCF11O94913 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.1□□□□□ -1.91
PCF11O94913 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.1□□□□□ -1.91
PCF11O94913 RPS3AP4-201ENST00000555161 764 ntBASIC3.1□□□□□ -1.91
PCF11O94913 WISP1-OT1-201ENST00000602893 642 ntBASIC3.1□□□□□ -1.91
PCF11O94913 AC005156.1-201ENST00000613371 573 ntBASIC3.1□□□□□ -1.91
PCF11O94913 AC005296.1-201ENST00000616145 209 ntBASIC3.1□□□□□ -1.91
PCF11O94913 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCF11O94913 ZNF720P1-201ENST00000562403 1939 ntBASIC3.09□□□□□ -1.91
PCF11O94913 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PCF11O94913 Y_RNA.191-201ENST00000363972 113 ntBASIC3.09□□□□□ -1.91
PCF11O94913 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.09□□□□□ -1.91
PCF11O94913 MTCO3P30-201ENST00000426425 670 ntBASIC3.09□□□□□ -1.91
PCF11O94913 FO393414.1-201ENST00000428697 1184 ntBASIC3.09□□□□□ -1.91
PCF11O94913 GTF2IP9-201ENST00000502460 301 ntBASIC3.09□□□□□ -1.91
PCF11O94913 AC113398.2-201ENST00000507630 558 ntBASIC3.09□□□□□ -1.91
PCF11O94913 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.09□□□□□ -1.91
PCF11O94913 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.09□□□□□ -1.91
PCF11O94913 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.09□□□□□ -1.91
PCF11O94913 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.09□□□□□ -1.91
PCF11O94913 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCF11O94913 RNU6-392P-201ENST00000364926 101 ntBASIC3.08□□□□□ -1.92
PCF11O94913 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCF11O94913 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.08□□□□□ -1.92
PCF11O94913 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
PCF11O94913 RPS27P5-201ENST00000444247 244 ntBASIC3.08□□□□□ -1.92
PCF11O94913 ARL5AP2-201ENST00000444698 533 ntBASIC3.08□□□□□ -1.92
PCF11O94913 RPS15AP17-201ENST00000470598 390 ntBASIC3.08□□□□□ -1.92
PCF11O94913 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCF11O94913 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.08□□□□□ -1.92
PCF11O94913 AC078918.1-201ENST00000498515 228 ntBASIC3.08□□□□□ -1.92
PCF11O94913 ATG10-AS1-201ENST00000504846 648 ntBASIC3.08□□□□□ -1.92
PCF11O94913 IGHV3-76-201ENST00000522465 295 ntBASIC3.08□□□□□ -1.92
PCF11O94913 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.08□□□□□ -1.92
PCF11O94913 AC126118.1-201ENST00000607744 628 ntBASIC3.08□□□□□ -1.92
PCF11O94913 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.08□□□□□ -1.92
PCF11O94913 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCF11O94913 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCF11O94913 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCF11O94913 BTBD10P2-201ENST00000404779 676 ntBASIC3.08□□□□□ -1.92
PCF11O94913 RNA5SP181-201ENST00000410246 98 ntBASIC3.08□□□□□ -1.92
PCF11O94913 RNA5SP338-201ENST00000410495 85 ntBASIC3.08□□□□□ -1.92
PCF11O94913 AC004022.2-201ENST00000413824 193 ntBASIC3.08□□□□□ -1.92
PCF11O94913 POLR2J4-204ENST00000418424 324 ntBASIC3.08□□□□□ -1.92
PCF11O94913 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.08□□□□□ -1.92
PCF11O94913 UBE2V1P5-201ENST00000440070 405 ntBASIC3.08□□□□□ -1.92
PCF11O94913 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCF11O94913 Z73417.1-201ENST00000447373 778 ntBASIC3.08□□□□□ -1.92
PCF11O94913 AC093392.2-201ENST00000450682 337 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms