Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OR8L1P-201ENST00000534005 955 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AL121579.1-201ENST00000555129 305 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AL359212.1-201ENST00000556608 614 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS4BO75351 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AC012409.3-201ENST00000611343 981 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 AC025253.1-201ENST00000613623 543 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AC009161.2-201ENST00000624626 138 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AL159972.1-201ENST00000625150 448 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 CR848007.1-201ENST00000442354 1699 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 PNPT1P2-201ENST00000456768 2050 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS4BO75351 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 AC027287.1-201ENST00000553115 1453 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VPS4BO75351 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 RNU6-1097P-201ENST00000363586 107 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 RNU6-1279P-201ENST00000383917 103 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RNU6-483P-201ENST00000384088 108 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MIR513A2-201ENST00000385249 127 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MIR3065-201ENST00000390137 79 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RNU6-821P-201ENST00000390995 107 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 AMD1P2-201ENST00000412936 992 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AC138393.2-201ENST00000414742 246 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MTATP6P18-201ENST00000417994 673 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 USP9YP27-201ENST00000418455 438 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 EIF1P3-201ENST00000423841 334 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RPS29P17-201ENST00000430795 166 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AL121601.2-201ENST00000438019 707 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AC093156.1-201ENST00000440382 670 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 PHBP16-201ENST00000446318 950 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AL671855.1-201ENST00000446875 1203 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RPL29P29-201ENST00000448725 423 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 AC053481.1-201ENST00000467217 306 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RN7SL585P-201ENST00000470538 280 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 AC105137.1-201ENST00000484355 562 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 RNU6-358P-201ENST00000516564 75 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS4BO75351 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS4BO75351 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS4BO75351 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS4BO75351 SUB1P2-201ENST00000556401 297 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AC008752.3-201ENST00000588113 712 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AL669831.4-202ENST00000590817 238 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AC008638.3-201ENST00000603341 463 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 MIR6891-201ENST00000618788 93 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 AL445567.2-201ENST00000618935 498 ntBASIC4.23□□□□□ -1.73
VPS4BO75351 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS4BO75351 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VPS4BO75351 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VPS4BO75351 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS4BO75351 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS4BO75351 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS4BO75351 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS4BO75351 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS4BO75351 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS4BO75351 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
VPS4BO75351 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS4BO75351 RNA5SP502-201ENST00000362694 119 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 MIR554-201ENST00000384874 96 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 MIR670-201ENST00000390142 98 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 RPL32P23-201ENST00000397237 405 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 MIR1250-201ENST00000408098 113 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 RNU6-908P-201ENST00000410160 94 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 RN7SKP202-201ENST00000410439 330 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 AL161631.1-201ENST00000417933 486 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS4BO75351 AC119618.1-201ENST00000434191 222 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 AL590399.6-201ENST00000446396 307 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 DPPA3P1-201ENST00000448050 469 ntBASIC4.22□□□□□ -1.73
VPS4BO75351 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms