Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CPNE3O75131 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPNE3O75131 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPNE3O75131 OR4F13P-202ENST00000560066 2054 ntBASIC5.19□□□□□ -1.58
CPNE3O75131 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPNE3O75131 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPNE3O75131 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 AC092376.2-201ENST00000622621 4116 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 RNU6-490P-201ENST00000362985 107 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 RNU6-266P-201ENST00000364225 107 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 SNORA70.6-201ENST00000383934 134 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 SNORA51.8-201ENST00000384234 132 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 Y_RNA.480-201ENST00000384364 102 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 Y_RNA.527-201ENST00000384573 102 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CPNE3O75131 RNU6-293P-201ENST00000411259 106 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 SRSF1P1-201ENST00000424058 520 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 NRBF2P3-201ENST00000432731 865 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 GSTM5P1-201ENST00000434751 660 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.18□□□□□ -1.58
CPNE3O75131 PTMAP6-201ENST00000439110 327 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.18□□□□□ -1.58
CPNE3O75131 PRDX3P3-201ENST00000447765 522 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 RPL21P41-201ENST00000459863 264 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC103987.1-201ENST00000473394 348 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 RN7SL222P-201ENST00000476452 299 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC084198.1-201ENST00000477747 402 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 RPL31P60-201ENST00000478450 367 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC015911.1-201ENST00000495111 156 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 RN7SL591P-201ENST00000496150 292 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.18□□□□□ -1.58
CPNE3O75131 RNU6-699P-201ENST00000517081 110 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 ERHP1-201ENST00000523006 310 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.18□□□□□ -1.58
CPNE3O75131 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.18□□□□□ -1.58
CPNE3O75131 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.18□□□□□ -1.58
CPNE3O75131 BDH2P1-201ENST00000602288 736 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AL161423.1-201ENST00000613700 262 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 MIR7155-201ENST00000615925 56 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 AC099669.2-201ENST00000616549 437 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 MIR6730-201ENST00000622213 67 ntBASIC5.18□□□□□ -1.58
CPNE3O75131 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CPNE3O75131 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CPNE3O75131 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.18□□□□□ -1.58
CPNE3O75131 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CPNE3O75131 PCAT14-202ENST00000627127 3935 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.17□□□□□ -1.58
CPNE3O75131 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CPNE3O75131 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CPNE3O75131 Y_RNA.149-201ENST00000363558 117 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 SNORA58B-201ENST00000364259 136 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 RNU6-1303P-201ENST00000364841 107 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.17□□□□□ -1.58
CPNE3O75131 RNA5SP487-201ENST00000410186 122 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 RN7SKP213-201ENST00000410746 298 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC119751.6-201ENST00000416712 186 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.17□□□□□ -1.58
CPNE3O75131 USMG5P1-201ENST00000425964 177 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 RSL24D1P6-201ENST00000426934 401 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.17□□□□□ -1.58
CPNE3O75131 GAPDHP58-201ENST00000438477 1006 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.17□□□□□ -1.58
CPNE3O75131 SNORD5.1-201ENST00000458800 75 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AP000926.1-201ENST00000479573 241 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.17□□□□□ -1.58
CPNE3O75131 AC009901.1-201ENST00000506703 541 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.17□□□□□ -1.58
CPNE3O75131 HMGN2P6-201ENST00000551091 273 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AL121603.1-201ENST00000553815 142 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 RPL23AP87-202ENST00000573039 466 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC005951.2-201ENST00000576282 495 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 MIR5692A1-201ENST00000580523 69 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC073539.2-201ENST00000597113 165 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.17□□□□□ -1.58
CPNE3O75131 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CPNE3O75131 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CPNE3O75131 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
CPNE3O75131 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CPNE3O75131 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CPNE3O75131 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.16□□□□□ -1.58
CPNE3O75131 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CPNE3O75131 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CPNE3O75131 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CPNE3O75131 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms