Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PPP1R11P2-201ENST00000423543 382 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.17□□□□□ -1.74
PHGDHO43175 MTCO1P39-201ENST00000426148 480 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 TIMM9P3-201ENST00000428659 274 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.17□□□□□ -1.74
PHGDHO43175 MTCO3P45-201ENST00000443036 613 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AL512326.1-201ENST00000443050 721 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC016696.1-201ENST00000446949 318 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC006480.1-201ENST00000449887 378 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 RPS24P6-201ENST00000452670 400 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC013267.1-201ENST00000458227 267 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AP000873.1-201ENST00000463987 400 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AL672167.3-201ENST00000465951 960 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AP000926.1-201ENST00000479573 241 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC110792.1-201ENST00000491826 472 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC078918.1-201ENST00000498515 228 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.17□□□□□ -1.74
PHGDHO43175 VN1R104P-201ENST00000505115 1009 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC009646.1-201ENST00000510455 318 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.17□□□□□ -1.74
PHGDHO43175 RNU6-718P-201ENST00000516166 105 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 RNU2-10P-201ENST00000516375 211 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 SCARNA24.1-201ENST00000516465 137 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 RNA5SP519-201ENST00000516480 119 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 RN7SKP92-201ENST00000517266 244 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC090572.1-201ENST00000519251 160 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.17□□□□□ -1.74
PHGDHO43175 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC063950.1-201ENST00000552036 308 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC068831.4-201ENST00000556118 109 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.17□□□□□ -1.74
PHGDHO43175 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC012507.3-201ENST00000603556 477 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AL139286.1-201ENST00000604465 483 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 Z84480.1-201ENST00000605131 311 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.17□□□□□ -1.74
PHGDHO43175 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC244100.1-202ENST00000621554 382 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.17□□□□□ -1.74
PHGDHO43175 AC009161.2-201ENST00000624626 138 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 MIR4275-201ENST00000636486 87 ntBASIC4.17□□□□□ -1.74
PHGDHO43175 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.17□□□□□ -1.74
PHGDHO43175 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHGDHO43175 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PHGDHO43175 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHGDHO43175 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHGDHO43175 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
PHGDHO43175 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.17□□□□□ -1.74
PHGDHO43175 CR848007.1-201ENST00000442354 1699 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC138915.3-201ENST00000562908 1389 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 RNU1-14P-201ENST00000362759 152 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU6-511P-201ENST00000363496 107 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 SNORA23-201ENST00000365128 182 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU6-108P-201ENST00000365558 107 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 Y_RNA.409-201ENST00000383990 98 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU6-398P-201ENST00000384143 109 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU6-39P-201ENST00000384344 107 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 SNORA37-201ENST00000384504 129 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 MIR192-201ENST00000384915 110 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PHGDHO43175 BTF3P7-201ENST00000407097 488 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.16□□□□□ -1.74
PHGDHO43175 RPL23AP30-201ENST00000432419 501 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RPL21P112-201ENST00000434403 463 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC024082.2-201ENST00000434771 238 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.16□□□□□ -1.74
PHGDHO43175 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 RPS26P15-201ENST00000488067 348 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC105914.1-201ENST00000511798 226 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC010342.1-201ENST00000514047 877 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU7-51P-201ENST00000516560 62 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RNU6-410P-201ENST00000517006 107 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC105233.3-201ENST00000531125 744 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.16□□□□□ -1.74
PHGDHO43175 AC105224.1-201ENST00000587055 421 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC098848.2-201ENST00000588023 330 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 GLUD1P4-201ENST00000590914 418 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 RBM11P1-201ENST00000604951 799 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 MIR6820-201ENST00000611508 62 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 MIR7702-201ENST00000621931 59 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms