Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 RNU6-763P-201ENST00000390865 106 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 RNY4P29-201ENST00000410801 97 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 RN7SL369P-201ENST00000477138 299 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 RNU6-772P-201ENST00000516042 105 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 RNA5SP340-201ENST00000517132 107 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 MIR3121-201ENST00000579680 77 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 MIR4443-201ENST00000585052 53 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 AC069307.1-201ENST00000602820 447 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 MIR6768-201ENST00000610734 72 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 AL357075.2-201ENST00000614906 189 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 AL354718.1-201ENST00000619764 589 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 MIR6844-201ENST00000637122 62 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 LCOR-201ENST00000286067 4542 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 AL589993.1-201ENST00000407450 2524 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC105235.1-201ENST00000623208 1816 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AL034546.1-201ENST00000623740 3693 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 RNU6-235P-201ENST00000362644 107 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 SNORD16-201ENST00000362803 99 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 Y_RNA.101-201ENST00000363154 102 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 RNU6-407P-201ENST00000365280 104 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 Y_RNA.595-201ENST00000410403 105 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC016027.4-201ENST00000450866 277 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 U8.19-201ENST00000459095 133 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 RN7SKP122-201ENST00000515923 296 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 RNA5SP271-201ENST00000516700 88 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 MRPL57P1-201ENST00000621486 265 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC127024.6-201ENST00000621598 424 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 AC062029.1-202ENST00000606164 3651 ntBASIC5.32□□□□□ -1.56
RNF223E7ERA6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF223E7ERA6 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF223E7ERA6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNF223E7ERA6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
RNF223E7ERA6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
RNF223E7ERA6 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNF223E7ERA6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF223E7ERA6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms