Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC005741.1-201ENST00000511094 432 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 TTC39CP1-201ENST00000512513 755 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 RNA5SP497-201ENST00000516081 97 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.718-201ENST00000517110 102 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 MIR5699-201ENST00000578903 90 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 POLR3GP2-201ENST00000588366 668 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC005255.1-201ENST00000593748 216 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC068790.3-201ENST00000602988 553 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC084781.2-201ENST00000615568 161 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL133216.2-202ENST00000634512 349 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 C4BPAP1-201ENST00000415474 1893 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC083843.3-201ENST00000623679 2186 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 SNORD116-29-201ENST00000384516 83 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 U3.29-201ENST00000391296 212 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AL583835.1-201ENST00000399570 407 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC245054.2-201ENST00000415639 319 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 BX510359.3-201ENST00000422168 306 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AL732292.1-201ENST00000426692 226 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AL590639.1-201ENST00000456484 337 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC018638.3-201ENST00000461273 132 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC055855.1-201ENST00000489563 579 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC021146.2-201ENST00000504736 556 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC091885.1-201ENST00000506658 268 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 SNORD27.1-201ENST00000516319 72 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 SETP2-201ENST00000553886 926 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 MIR3668-201ENST00000582138 75 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC006006.1-201ENST00000603082 144 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC006329.2-201ENST00000611491 394 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 uc_338.15-201ENST00000615470 191 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC079597.1-201ENST00000624306 508 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 AC004972.1-201ENST00000623934 2209 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.79□□□□□ -1.8
CGB1A6NKQ9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CGB1A6NKQ9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 AL133243.3-201ENST00000617415 3004 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RN7SKP104-201ENST00000362605 328 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RNU6-989P-201ENST00000362756 107 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RNU4-66P-201ENST00000365199 138 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CGB1A6NKQ9 MIR708-201ENST00000390708 88 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 AL359634.1-202ENST00000404721 284 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RNA5SP239-201ENST00000410218 129 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RN7SKP229-201ENST00000410465 302 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 RNU2-39P-201ENST00000410604 198 ntBASIC3.78□□□□□ -1.8
CGB1A6NKQ9 AC093162.1-201ENST00000419682 124 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms