Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 AL138713.1-201ENST00000624026 2130 ntBASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV7S3A2A0A539 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RNU4-1-201ENST00000363925 141 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RPL23AP32-201ENST00000395315 459 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 MRPL42P2-201ENST00000403169 426 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RPS7P15-201ENST00000415804 584 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 MTND3P17-201ENST00000416968 344 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC233728.2-201ENST00000425348 757 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 FAR2P4-202ENST00000425399 584 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RPS3AP17-201ENST00000472594 777 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC126182.1-201ENST00000478134 357 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RPL9P6-201ENST00000492764 598 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC108078.1-201ENST00000508073 725 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-506P-201ENST00000516553 94 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC107934.1-201ENST00000522215 217 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC136619.2-201ENST00000563361 631 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL391840.1-201ENST00000571144 367 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC245014.2-201ENST00000603689 287 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC246785.4-201ENST00000605374 287 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 AC073534.2-201ENST00000620377 381 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV7S3A2A0A539 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC074029.4-201ENST00000624796 1859 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-1249P-201ENST00000363237 111 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RAD23BP2-201ENST00000416003 1207 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 BX295541.1-201ENST00000417774 250 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC092832.1-201ENST00000422934 400 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC002075.2-201ENST00000425207 252 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AL359385.1-201ENST00000456509 365 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC004924.1-201ENST00000480160 781 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AF213884.2-201ENST00000510417 903 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-1095P-201ENST00000516148 108 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RN7SKP244-201ENST00000516513 307 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 ZNF519P2-201ENST00000557032 169 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC006960.3-201ENST00000561845 705 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 TPRKBP2-201ENST00000565969 475 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 MIR4700-201ENST00000578311 74 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 MIR3146-201ENST00000580367 79 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 MTATP6P3-201ENST00000581686 676 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AC020910.2-201ENST00000603635 610 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 U4.5-201ENST00000617137 123 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 AL136964.1-201ENST00000622038 2990 ntBASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV7S3A2A0A539 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 SPRR2C-201ENST00000290702 219 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms