Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL669831.4-202ENST00000590817 238 ntBASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 AC008687.2-201ENST00000597865 520 ntBASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 AC079089.3-201ENST00000603094 673 ntBASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 AL360181.4-201ENST00000621752 134 ntBASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV27A0A087WT01 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 XGY1-201ENST00000381172 446 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 RNU4-74P-201ENST00000411280 161 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 OR5H5P-201ENST00000503164 928 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 RNU6-491P-201ENST00000516099 110 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 SNORA31.8-201ENST00000516327 108 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 SUB1P1-201ENST00000524415 382 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AL442163.2-201ENST00000553912 710 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AL121917.1-203ENST00000605534 577 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC092954.1-201ENST00000609121 445 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AC006329.2-201ENST00000611491 394 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 MIR6873-201ENST00000622788 63 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 CU459211.1-201ENST00000635667 749 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV27A0A087WT01 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RNA5SP258-201ENST00000362750 119 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RNU1-73P-201ENST00000383971 164 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RPL7P30-201ENST00000420888 709 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 OFD1P18Y-201ENST00000420889 959 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 FO393419.3-201ENST00000428741 282 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AL645638.1-201ENST00000440519 361 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 USP9YP8-201ENST00000441913 500 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC011753.1-201ENST00000451001 220 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 HSPE1P6-201ENST00000479457 291 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC114322.1-201ENST00000506771 926 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RNU1-103P-201ENST00000516502 125 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AP000790.1-201ENST00000528891 737 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 EIF5A2P1-201ENST00000564027 460 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 OR4K7P-201ENST00000580232 945 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC009314.1-201ENST00000603871 304 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC010378.1-201ENST00000619270 362 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 AC046144.1-201ENST00000478559 1853 ntBASIC1.88□□□□□ -2.11
TRAV27A0A087WT01 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AL024474.1-201ENST00000404655 591 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC114973.1-201ENST00000429057 632 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC097499.1-201ENST00000444277 208 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 DPPA3P1-201ENST00000448050 469 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 HMGN1P5-201ENST00000448591 263 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC108157.1-201ENST00000510511 539 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC113155.1-201ENST00000511141 769 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AP001804.3-201ENST00000525146 880 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms