Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
GPC6Q9Y625 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.55
GPC6Q9Y625 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC6Q9Y625 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
GPC6Q9Y625 AC007529.1-201ENST00000418574 2178 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 OR52B3P-201ENST00000314715 928 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 Y_RNA.150-201ENST00000363562 102 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 Y_RNA.471-201ENST00000384312 102 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AL030996.1-201ENST00000411430 235 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 PPIAP21-201ENST00000464473 501 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 HMGB1P25-201ENST00000468402 607 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 MTND3P25-201ENST00000509243 135 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC090151.1-201ENST00000520784 730 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC068446.3-201ENST00000555285 382 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC127381.1-201ENST00000555979 939 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AMZ2P1-203ENST00000565833 850 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 RPL23AP87-202ENST00000573039 466 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC010201.1-201ENST00000605051 540 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 MIR3976-201ENST00000606807 139 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 MIR15A-201ENST00000607334 83 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 MIR6809-201ENST00000612189 116 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 AL159153.1-201ENST00000619688 317 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AL512643.1-201ENST00000635735 524 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
GPC6Q9Y625 AP004607.3-201ENST00000530354 3915 ntBASIC5.39□□□□□ -1.55
GPC6Q9Y625 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC6Q9Y625 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC6Q9Y625 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 BRAFP1-201ENST00000445336 2703 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC019155.1-201ENST00000382242 574 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 RNU1-136P-201ENST00000384181 164 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 Y_RNA.478-201ENST00000384358 107 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 MIR135A2-201ENST00000384854 100 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 RNU6-174P-201ENST00000410406 106 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 RN7SKP286-201ENST00000410894 299 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC073063.1-201ENST00000434352 607 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 DAP3P1-201ENST00000441522 278 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL139109.1-201ENST00000455491 297 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 Z92846.1-201ENST00000456203 268 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL122020.1-201ENST00000472287 459 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC010683.1-201ENST00000473673 378 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 ENPP7P11-201ENST00000505915 627 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 RNA5SP340-201ENST00000517132 107 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC079905.1-201ENST00000549280 475 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC004584.2-201ENST00000570407 410 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 RN7SL652P-201ENST00000577769 300 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 AC233702.9-201ENST00000581528 203 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL355812.1-201ENST00000603215 216 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL450472.3-201ENST00000615578 367 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 AL031601.2-202ENST00000622650 282 ntBASIC5.38□□□□□ -1.55
GPC6Q9Y625 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC6Q9Y625 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC6Q9Y625 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms