Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AL020997.3-201ENST00000602843 359 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AL451074.6-201ENST00000608512 729 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AC107871.2-201ENST00000612894 502 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RNU6-839P-201ENST00000363347 108 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 SNORA36C-201ENST00000384289 132 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MIR27B-201ENST00000385129 97 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MIR620-201ENST00000385232 95 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RSL24D1P4-201ENST00000400938 484 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 BTF3P8-201ENST00000414577 526 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RPS7P9-201ENST00000414704 586 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MTND2P16-201ENST00000419987 799 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC092634.2-201ENST00000428146 1010 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC011816.1-201ENST00000441346 546 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AL662791.1-201ENST00000441992 928 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MTND2P39-201ENST00000457230 764 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RPL21P104-201ENST00000464143 478 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MTND3P3-201ENST00000505004 126 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 SUMO2P5-201ENST00000506790 245 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC008549.1-201ENST00000512900 643 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 RN7SKP24-201ENST00000515888 284 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 SNORA9.3-201ENST00000516383 129 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AP000857.1-201ENST00000532151 543 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 LSM6P2-201ENST00000552208 177 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 OR4T1P-201ENST00000554933 911 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 YWHAZP1-201ENST00000556286 722 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC044913.1-201ENST00000557200 430 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC093519.1-201ENST00000566109 298 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 MIR3690-201ENST00000580266 75 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 OR4G1P-201ENST00000588632 938 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AP003973.1-201ENST00000604639 691 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
USP16Q9Y5T5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.3□□□□□ -1.88
USP16Q9Y5T5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 RNU6-374P-201ENST00000364146 108 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 SNORA51.2-201ENST00000364595 132 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 RNU6-921P-201ENST00000384361 107 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 MIR649-201ENST00000384843 97 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 Y_RNA.578-201ENST00000390903 88 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 MTND4P3-201ENST00000417829 541 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 MTCYBP24-201ENST00000420387 1106 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 MTCYBP32-201ENST00000427945 1084 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 RPL21P112-201ENST00000434403 463 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 SDR42E1P3-201ENST00000438345 502 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 NECAP1P2-201ENST00000455668 727 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC079203.1-201ENST00000487972 404 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 BOLA3P3-201ENST00000505182 232 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC100870.1-201ENST00000522035 505 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC090616.5-202ENST00000582111 297 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AF129408.1-201ENST00000608767 431 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.29□□□□□ -1.88
USP16Q9Y5T5 CR381653.2-201ENST00000624041 768 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 AC004808.1-201ENST00000627671 721 ntBASIC3.29□□□□□ -1.88
USP16Q9Y5T5 CTSLP2-204ENST00000629029 392 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms