Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 AC005191.1-201ENST00000603950 358 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 AC083806.3-201ENST00000614016 455 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 AL590099.1-201ENST00000615276 138 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 MIR6853-201ENST00000619642 74 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 MIR7703-201ENST00000620784 77 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 MTND5P28-201ENST00000438005 1594 ntBASIC6.05□□□□□ -1.44
CHMP3Q9Y3E7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC121333.1-201ENST00000567488 2709 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL590240.1-201ENST00000334118 313 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-179P-201ENST00000363350 107 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-1243P-201ENST00000364028 107 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-188P-201ENST00000364207 107 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-398P-201ENST00000384143 109 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-310P-201ENST00000384655 107 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RPS16P5-201ENST00000406501 404 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL591848.1-201ENST00000413092 322 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC114755.2-201ENST00000413520 361 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC114482.1-201ENST00000418010 247 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC069213.2-201ENST00000420238 366 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL035666.1-201ENST00000446195 348 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RPL23AP43-201ENST00000446445 471 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RN7SL459P-201ENST00000481078 302 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AP006289.1-201ENST00000538089 277 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC024619.4-201ENST00000580924 316 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 MIR5690-201ENST00000583739 73 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AL157817.1-201ENST00000614264 790 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 SOCS5P3-201ENST00000425115 1576 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 AC011755.1-201ENST00000623763 2049 ntBASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP3Q9Y3E7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 RNU6-1115P-201ENST00000362490 106 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC013442.1-201ENST00000397347 228 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 MIR298-201ENST00000401212 88 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 Y_RNA.646-201ENST00000410980 101 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 VDAC1P9-201ENST00000412766 841 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 RAC1P6-201ENST00000423911 575 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC009965.2-201ENST00000425328 970 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AL451139.1-201ENST00000434718 346 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 RPL21P23-201ENST00000446654 460 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AL353691.1-201ENST00000451332 387 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 RNU2-10P-201ENST00000516375 211 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AL133271.1-201ENST00000538229 291 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC006349.1-201ENST00000555526 235 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC040958.1-201ENST00000561102 201 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC138761.3-201ENST00000579993 334 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 SNORA74C-1-201ENST00000580726 201 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC022726.1-201ENST00000587475 207 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC023813.4-201ENST00000607580 580 ntBASIC6.03□□□□□ -1.44
CHMP3Q9Y3E7 AC012409.4-201ENST00000612923 249 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms