Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL445669.2-201ENST00000454425 421 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC011979.1-201ENST00000472300 483 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC108734.3-201ENST00000481241 1165 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC068724.1-201ENST00000487100 792 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 RN7SL20P-201ENST00000488827 297 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC006445.1-201ENST00000491925 405 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AP002404.1-201ENST00000532005 451 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 HIGD1AP17-201ENST00000554576 276 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC012493.2-201ENST00000595083 291 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC103881.1-201ENST00000603476 538 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 RPP40P2-201ENST00000603596 712 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC012468.1-201ENST00000604888 430 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AL157392.4-201ENST00000609756 345 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 CYP3A51P-201ENST00000633513 256 ntBASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAPPC4Q9Y296 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 SNORA71.1-201ENST00000364523 117 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 SNORD67-201ENST00000390833 111 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 MTND4P13-201ENST00000402078 1023 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 ERHP2-201ENST00000402323 299 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RNU4-78P-201ENST00000410940 126 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC109780.2-201ENST00000413467 845 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 HSPE1P1-201ENST00000421494 318 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 MTCYBP11-201ENST00000447254 1109 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 ZNF886P-201ENST00000450781 723 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC092757.1-201ENST00000467293 467 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC134050.1-201ENST00000495088 933 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC010460.2-201ENST00000509054 677 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RNA5SP468-201ENST00000516782 93 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RNU6-711P-201ENST00000517255 106 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC005832.3-201ENST00000537929 631 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AADACP1-206ENST00000561502 1193 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC012182.1-201ENST00000570133 895 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 RNU4-5P-201ENST00000607255 135 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC006329.2-201ENST00000611491 394 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC016597.2-201ENST00000613256 341 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 AC006963.1-201ENST00000624003 1052 ntBASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAPPC4Q9Y296 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
TRAPPC4Q9Y296 CDR1-202ENST00000625883 1485 ntBASIC2.71□□□□□ -1.97
TRAPPC4Q9Y296 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 SNRPEP3-201ENST00000338402 276 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 RNA5SP258-201ENST00000362750 119 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 Y_RNA.408-201ENST00000383987 102 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 AC068533.2-201ENST00000411872 306 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 NANOGP5-201ENST00000424456 877 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 EEF1A1P39-201ENST00000440791 250 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 MTND2P20-201ENST00000440805 661 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 RPL23AP76-201ENST00000441860 458 ntBASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.71□□□□□ -1.98
TRAPPC4Q9Y296 RPS24P6-201ENST00000452670 400 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms