Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNORA67.5-201ENST00000391036 107 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AL590664.1-201ENST00000448065 339 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC078918.1-201ENST00000498515 228 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC103988.1-201ENST00000566382 2177 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 RPS3AP23-202ENST00000574601 686 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC083899.3-201ENST00000603413 594 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 AC011890.2-201ENST00000613393 294 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 LINC00216-201ENST00000623548 1126 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 XKRY2-202ENST00000623874 1581 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 XKRY-202ENST00000624960 1581 ntBASIC2.79□□□□□ -1.96
SHANK2Q9UPX8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 RNU6-392P-201ENST00000364926 101 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 RNA5SP37-201ENST00000365420 130 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 MTND2P16-201ENST00000419987 799 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC099336.2-201ENST00000422457 254 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AL590762.3-201ENST00000436372 640 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 Z73417.1-201ENST00000447373 778 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 RNU7-95P-201ENST00000459222 64 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC011352.3-201ENST00000505162 593 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 RN7SKP40-201ENST00000517211 242 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 AC010329.2-201ENST00000595195 2737 ntBASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SHANK2Q9UPX8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.78□□□□□ -1.97
SHANK2Q9UPX8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC093392.2-201ENST00000450682 337 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AL121594.1-201ENST00000475906 575 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC109486.1-201ENST00000486833 374 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 RNU6-250P-201ENST00000516958 103 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 IGLV3-17-201ENST00000519099 244 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 PRELID2P1-201ENST00000552837 301 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 WISP1-OT1-201ENST00000602893 642 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC114546.3-201ENST00000623582 1734 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 CKAP2P1-201ENST00000555477 2049 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 Y_RNA.374-201ENST00000365606 101 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC073901.1-201ENST00000462471 408 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC107393.1-201ENST00000512403 346 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 SNORD39.2-201ENST00000579995 76 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 AL121594.5-201ENST00000631724 573 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 MTCO1P6-201ENST00000481192 1384 ntBASIC2.77□□□□□ -1.97
SHANK2Q9UPX8 CR382285.2-201ENST00000624662 1495 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 RNU6-1263P-201ENST00000384601 106 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 RNU4-74P-201ENST00000411280 161 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 AC023128.2-201ENST00000420880 1223 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 RPL7P46-201ENST00000425129 740 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 HMGB1P27-201ENST00000431429 603 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 AC079804.2-201ENST00000490376 200 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 AL159169.2-201ENST00000610061 1269 ntBASIC2.76□□□□□ -1.97
SHANK2Q9UPX8 KPNA2P1-201ENST00000458289 1591 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 CLIC4P1-201ENST00000453177 535 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 GTF2IP9-201ENST00000502460 301 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 AC034102.8-201ENST00000615146 484 ntBASIC2.75□□□□□ -1.97
SHANK2Q9UPX8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 HMGB1P31-201ENST00000437242 427 ntBASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 RPL12P25-201ENST00000455592 494 ntBASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 HMGN1P28-201ENST00000521340 364 ntBASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 AL135786.2-201ENST00000608422 615 ntBASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 AC092954.1-201ENST00000609121 445 ntBASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.74□□□□□ -1.97
SHANK2Q9UPX8 AC110774.1-201ENST00000623567 2018 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms