Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC090115.3-201ENST00000553218 849 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 HSBP1P1-201ENST00000555205 166 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC068446.3-201ENST00000555285 382 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC124068.1-201ENST00000563131 678 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 MIR4293-201ENST00000584305 78 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC006272.2-201ENST00000594725 163 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL138889.2-201ENST00000603883 242 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL158032.1-201ENST00000605401 106 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 EXOC5P1-201ENST00000510543 1969 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL591135.1-201ENST00000401578 5914 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 BTBD10P1-201ENST00000549824 1352 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RNA5SP326-201ENST00000363209 110 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.152-201ENST00000363578 100 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 SNORA57.1-201ENST00000391227 145 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MIR298-201ENST00000401212 88 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RPLP0P7-201ENST00000416050 667 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MRPS18BP2-201ENST00000434310 759 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RPL21P112-201ENST00000434403 463 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MTCO3P45-201ENST00000443036 613 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC022034.3-201ENST00000471393 478 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RPL21P129-201ENST00000491732 478 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC135721.1-201ENST00000497954 479 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 RN7SKP92-201ENST00000517266 244 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC137627.1-201ENST00000545761 289 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC008521.1-201ENST00000587471 187 ntBASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZC3H4Q9UPT8 OR4F13P-202ENST00000560066 2054 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-823P-201ENST00000391042 103 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 RPL35AP22-201ENST00000436855 335 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 HIGD1AP11-201ENST00000438361 280 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC005008.1-201ENST00000456151 612 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC053481.1-201ENST00000467217 306 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 RN7SL432P-201ENST00000484057 298 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 FTH1P24-201ENST00000503502 462 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 SNORA14.1-201ENST00000516113 141 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC131281.1-201ENST00000522984 164 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 RPL23AP84-201ENST00000571193 464 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 AC009570.1-201ENST00000609599 745 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 MIR6830-201ENST00000636015 70 ntBASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZC3H4Q9UPT8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms