Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MTND4P1-201ENST00000457501 1466 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 MTND5P33-201ENST00000571250 1450 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.315-201ENST00000365117 102 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.409-201ENST00000383990 98 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.445-201ENST00000384168 102 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 RNU6-474P-201ENST00000384243 107 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AL080315.1-201ENST00000406055 466 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 GSTA9P-201ENST00000406231 611 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 RN7SKP32-201ENST00000410167 303 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 CEACAMP1-201ENST00000434624 1035 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 RPL37P21-201ENST00000435890 276 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 HMGB3P12-201ENST00000438745 556 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 RNU1-95P-201ENST00000516357 160 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 RNU1-128P-201ENST00000516704 160 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 COX6CP5-201ENST00000527162 228 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AP000790.1-201ENST00000528891 737 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AC103710.4-201ENST00000609301 899 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AC087588.2-201ENST00000617667 426 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AC140113.4-201ENST00000622087 222 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 AC109315.1-201ENST00000584143 1347 ntBASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.128-201ENST00000363391 112 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNA5SP88-201ENST00000365560 109 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MIR525-201ENST00000384978 85 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ENSAP1-201ENST00000392855 326 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC113618.1-201ENST00000416747 285 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC091286.1-201ENST00000431233 461 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MTND5P22-201ENST00000458380 195 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MTCO2P29-201ENST00000465212 189 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RPS29P19-201ENST00000479709 171 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC034159.1-201ENST00000513885 583 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNA5SP216-201ENST00000516111 123 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNY4P37-201ENST00000516225 96 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RN7SKP116-201ENST00000516902 319 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 KCTD9P6-201ENST00000522306 950 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 OR4A45P-201ENST00000529954 901 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC124068.1-201ENST00000563131 678 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC025678.1-201ENST00000567861 338 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC004853.1-201ENST00000604902 698 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.97-201ENST00000363094 102 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNU6-621P-201ENST00000364752 109 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SOD2P1-201ENST00000396543 562 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AL078604.1-201ENST00000404609 466 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RNU2-62P-201ENST00000410868 191 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RPL7P4-203ENST00000430239 730 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 YWHAEP5-201ENST00000431545 765 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SUMO1P2-201ENST00000452524 304 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RPL7P48-201ENST00000461513 746 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SNX5P1-201ENST00000505757 1041 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.693-201ENST00000516641 110 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC092747.2-201ENST00000545069 983 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 CYCSP30-201ENST00000546447 172 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms