Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.38□□□□□ -1.87
HACD3Q9P035 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.38□□□□□ -1.87
HACD3Q9P035 MRPS33P3-201ENST00000513456 322 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 RNU6-150P-201ENST00000516237 95 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
HACD3Q9P035 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.38□□□□□ -1.87
HACD3Q9P035 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.38□□□□□ -1.87
HACD3Q9P035 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC015917.1-201ENST00000579654 510 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
HACD3Q9P035 AC004987.4-201ENST00000603383 338 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AL596327.1-201ENST00000603629 213 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC004009.2-201ENST00000623016 728 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC079228.1-201ENST00000624774 1049 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 AC127502.3-201ENST00000636170 1206 ntBASIC3.38□□□□□ -1.87
HACD3Q9P035 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HACD3Q9P035 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HACD3Q9P035 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HACD3Q9P035 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.37□□□□□ -1.87
HACD3Q9P035 RPL23AP57-201ENST00000332361 466 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 RNA5SP119-201ENST00000362715 117 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HACD3Q9P035 RNU6-821P-201ENST00000390995 107 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 UBE2D3P1-201ENST00000436669 444 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 VN1R34P-201ENST00000447387 883 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 ART2BP-201ENST00000453501 499 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 BTF3P5-201ENST00000457252 467 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 RPL31P50-201ENST00000471002 296 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 RPL21P129-201ENST00000491732 478 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HACD3Q9P035 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.37□□□□□ -1.87
HACD3Q9P035 RNU6-27P-201ENST00000516146 107 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 DUXAP2-201ENST00000519198 589 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 AC022861.1-201ENST00000522981 663 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC109635.4-202ENST00000531666 412 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 MRPS36P5-201ENST00000551909 298 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
HACD3Q9P035 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.37□□□□□ -1.87
HACD3Q9P035 ISCA1P3-201ENST00000577104 373 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 VN1R92P-201ENST00000598511 928 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AL357094.1-201ENST00000603845 844 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC025811.1-201ENST00000604312 472 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC018714.1-201ENST00000605028 208 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC024560.3-201ENST00000608482 349 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AP000676.3-201ENST00000623299 569 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 AC091925.2-201ENST00000625059 256 ntBASIC3.37□□□□□ -1.87
HACD3Q9P035 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HACD3Q9P035 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
HACD3Q9P035 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
HACD3Q9P035 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
HACD3Q9P035 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HACD3Q9P035 AL022578.1-201ENST00000439330 1433 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HACD3Q9P035 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
HACD3Q9P035 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HACD3Q9P035 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.36□□□□□ -1.87
HACD3Q9P035 RNA5SP197-201ENST00000363357 119 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 RNU1-33P-201ENST00000364249 162 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 RNU6-343P-201ENST00000364709 104 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HACD3Q9P035 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AC007742.1-201ENST00000425789 329 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
HACD3Q9P035 OR2AS1P-201ENST00000427827 319 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AL590233.1-201ENST00000430017 456 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.36□□□□□ -1.87
HACD3Q9P035 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 ELOCP26-201ENST00000436067 329 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AL591503.2-201ENST00000442314 1005 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
HACD3Q9P035 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.36□□□□□ -1.87
HACD3Q9P035 CYCSP35-201ENST00000451978 304 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 SUMO2P2-201ENST00000456482 255 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 HMGB1P25-201ENST00000468402 607 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AC010285.1-201ENST00000470580 392 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HACD3Q9P035 LINC00888-204ENST00000487386 421 ntBASIC3.36□□□□□ -1.87
HACD3Q9P035 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.36□□□□□ -1.87
HACD3Q9P035 AC104685.1-201ENST00000502445 371 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms