Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 Y_RNA.105-201ENST00000363182 111 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 SNORA58B-201ENST00000364259 136 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 GNG5P2-201ENST00000372054 207 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 RPS3AP2-201ENST00000407190 754 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 OR3A2-201ENST00000408891 1076 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-174P-201ENST00000410406 106 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-121P-201ENST00000410525 99 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 BX276092.3-201ENST00000424182 230 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 RPS27P18-201ENST00000431701 247 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AL445305.1-201ENST00000432577 575 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC005094.1-201ENST00000440420 368 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 OR2AQ1P-201ENST00000451972 200 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 TRBV5-2-201ENST00000489095 273 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC006499.3-201ENST00000506077 748 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 MIR2117-201ENST00000516780 80 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 IGLV3-30-201ENST00000524362 298 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AP006587.4-201ENST00000526053 529 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC010547.6-201ENST00000571789 193 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 MIR4293-201ENST00000584305 78 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.67□□□□□ -1.5
CUEDC1Q9NWM3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 Y_RNA.54-201ENST00000362766 105 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 SNORD81.1-201ENST00000363064 77 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 SNORD1C-201ENST00000363315 78 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNA5SP500-201ENST00000364486 119 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC016739.1-201ENST00000405359 345 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNU2-33P-201ENST00000410344 192 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNA5SP107-201ENST00000411358 122 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 SYF2P2-201ENST00000417620 583 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL035660.1-201ENST00000422041 222 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 ELOCP18-201ENST00000434209 337 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC064862.4-201ENST00000442180 334 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AP006222.1-205ENST00000450734 457 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RN7SL57P-201ENST00000493687 290 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC092436.3-201ENST00000511788 257 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-1278P-201ENST00000516130 107 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-798P-201ENST00000516912 103 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AP006245.2-201ENST00000522004 300 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC025423.5-201ENST00000550230 219 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC008162.1-201ENST00000604718 254 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AL670379.4-201ENST00000605279 254 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 RN7SL787P-201ENST00000613000 284 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CUEDC1Q9NWM3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms