Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 CCNHP1-201ENST00000513311 678 ntBASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 AC022069.1-201ENST00000582910 658 ntBASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 CR392039.4-201ENST00000624968 501 ntBASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 AL137790.1-201ENST00000634283 177 ntBASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
SMCO4Q9NRQ5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AL359715.4-201ENST00000606629 1436 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 OR1L1-202ENST00000373686 1083 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 MIR34B-201ENST00000385076 84 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC068050.1-201ENST00000394891 380 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 RNU6-920P-201ENST00000410926 92 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AL139156.1-201ENST00000412785 841 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AL356320.2-201ENST00000417263 507 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 MTAPP1-201ENST00000489154 819 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 RNA5SP281-201ENST00000516504 135 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 IGKV3-31-201ENST00000523109 329 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC087272.1-201ENST00000523624 533 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AP005435.4-201ENST00000529514 284 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC007375.1-201ENST00000554513 578 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC005412.1-201ENST00000580812 1049 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC019131.2-201ENST00000609071 870 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AL161423.1-201ENST00000613700 262 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 MIR6817-201ENST00000615588 66 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 U73479.1-201ENST00000618062 168 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AC073592.7-201ENST00000623659 507 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 AL137003.2-201ENST00000606924 2538 ntBASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO4Q9NRQ5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.4□□□□□ -2.18
SMCO4Q9NRQ5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 BTF3P7-201ENST00000407097 488 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 MTND4P11-201ENST00000417020 1058 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 ARL4AP4-201ENST00000434170 518 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 XKRY2-201ENST00000442362 1093 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC055731.1-201ENST00000474387 401 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 RN7SKP132-201ENST00000516001 208 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 RNA5SP148-201ENST00000516527 94 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC068339.2-201ENST00000534395 618 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 CBX3P4-201ENST00000538909 354 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 MIR4287-201ENST00000579398 78 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC022884.3-201ENST00000579571 248 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC079880.2-201ENST00000603790 1213 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 SNORA35B-201ENST00000607417 129 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC126118.1-201ENST00000607744 628 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 MIR6873-201ENST00000622788 63 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 AC004520.1-201ENST00000608362 1413 ntBASIC1.4□□□□□ -2.19
SMCO4Q9NRQ5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 SNORA1.3-201ENST00000384676 136 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 RNU2-20P-201ENST00000410425 191 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 POLHP1-201ENST00000411806 470 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AC009237.2-201ENST00000421358 284 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AC092017.2-201ENST00000427600 362 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AC044797.1-201ENST00000445744 679 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 SAP18P1-201ENST00000512058 390 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 HSBP1P1-201ENST00000555205 166 ntBASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.39□□□□□ -2.19
SMCO4Q9NRQ5 AL354943.1-201ENST00000572103 781 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms