Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL161631.1-201ENST00000417933 486 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 OR1AA1P-201ENST00000419597 916 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 MTND4LP11-201ENST00000422184 280 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC079781.2-201ENST00000446424 169 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 RPL23AP20-201ENST00000447965 421 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 NPM1P49-201ENST00000448027 714 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 ABCF2P2-201ENST00000450549 296 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 MTND2P24-201ENST00000453434 806 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC146944.2-203ENST00000502493 354 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC108145.1-201ENST00000503770 153 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC009646.1-201ENST00000510455 318 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC139495.1-202ENST00000513164 354 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 RNU6-1095P-201ENST00000516148 108 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC134698.4-201ENST00000523451 826 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AP000857.1-201ENST00000532151 543 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC018630.1-201ENST00000541376 925 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 MIR3167-201ENST00000579623 85 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC090616.5-202ENST00000582111 297 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AL606490.9-201ENST00000603331 271 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC245517.5-201ENST00000611529 162 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC093838.1-201ENST00000613014 469 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 U6.42-201ENST00000618440 107 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC091905.1-201ENST00000624400 311 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AC004520.1-201ENST00000608362 1413 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC138915.3-201ENST00000562908 1389 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 RNU6-1085P-201ENST00000363576 107 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 SNORA62.3-201ENST00000365110 153 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 Y_RNA.450-201ENST00000384198 113 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 MIR1277-201ENST00000408536 78 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 RN7SKP167-201ENST00000411047 285 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 RNU6-516P-201ENST00000411381 104 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 ELOCP4-201ENST00000420090 333 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 RBMX2P4-201ENST00000441256 376 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC010655.1-201ENST00000449336 292 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 FABP3P2-201ENST00000453169 399 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC234775.1-201ENST00000454247 670 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 OR5AQ1P-201ENST00000527596 927 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC006504.3-201ENST00000586818 523 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AL158211.4-201ENST00000606988 584 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC140113.4-201ENST00000622087 222 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 AC009161.2-201ENST00000624626 138 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.68□□□□□ -1.66
VTA1Q9NP79 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.68□□□□□ -1.66
VTA1Q9NP79 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTA1Q9NP79 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RNU6-1249P-201ENST00000363237 111 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 RNY4P16-201ENST00000364768 94 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 Y_RNA.402-201ENST00000383972 102 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms