Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Vault.1-201ENST00000516474 102 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 IGHV3-32-201ENST00000519182 355 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.94□□□□□ -1.78
CDT1Q9H211 CENPUP2-201ENST00000555897 1186 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.94□□□□□ -1.78
CDT1Q9H211 MIR4528-201ENST00000577763 90 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC010591.1-201ENST00000603941 649 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC098614.4-201ENST00000607601 462 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC027807.2-201ENST00000616099 408 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AL445264.1-201ENST00000621719 171 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AL732618.1-201ENST00000623251 301 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC092447.7-201ENST00000422212 1621 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDT1Q9H211 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDT1Q9H211 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDT1Q9H211 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDT1Q9H211 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDT1Q9H211 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 HMGN2P8-201ENST00000391458 268 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 MTND4LP20-201ENST00000402379 270 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL121834.1-202ENST00000404494 277 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.93□□□□□ -1.78
CDT1Q9H211 DBIP2-201ENST00000419076 262 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 OFD1P18Y-201ENST00000420889 959 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 MTND4LP11-201ENST00000422184 280 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 RPL21P109-201ENST00000422213 475 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AL445669.1-201ENST00000426743 755 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AL590233.1-201ENST00000430017 456 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 USP9YP7-201ENST00000436723 430 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 PDSS1P2-201ENST00000449397 678 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 USP9YP32-201ENST00000452432 430 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 HMGB3P30-201ENST00000457863 606 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AC021678.1-201ENST00000505195 936 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AC025881.1-201ENST00000518851 512 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 MTCYBP41-201ENST00000528913 1123 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC068587.4-201ENST00000533893 186 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.93□□□□□ -1.78
CDT1Q9H211 PRELID3BP8-201ENST00000604148 295 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 NDUFA8P1-201ENST00000605525 367 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL390208.1-201ENST00000605885 644 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC126118.1-201ENST00000607744 628 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDT1Q9H211 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 AC090337.1-201ENST00000579651 2074 ntBASIC3.93□□□□□ -1.78
CDT1Q9H211 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.93□□□□□ -1.78
CDT1Q9H211 NUP58P1-201ENST00000502546 1738 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 TEX21P-201ENST00000447107 1476 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.92□□□□□ -1.78
CDT1Q9H211 ZNF734P-201ENST00000419494 1534 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RNU6-356P-201ENST00000384140 107 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RNU6-878P-201ENST00000384578 110 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RNU6-297P-201ENST00000384636 107 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 U8.14-201ENST00000390843 143 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 MTHFD2P2-201ENST00000407725 247 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RN7SKP266-201ENST00000410232 287 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RPS7P13-201ENST00000413955 498 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 MTCO2P5-201ENST00000422621 426 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.92□□□□□ -1.78
CDT1Q9H211 AC007742.1-201ENST00000425789 329 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.92□□□□□ -1.78
CDT1Q9H211 RPL37P21-201ENST00000435890 276 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 ELOCP26-201ENST00000436067 329 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.92□□□□□ -1.78
CDT1Q9H211 MTATP6P13-201ENST00000438531 667 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 AF228730.2-201ENST00000438784 848 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 AL022238.1-201ENST00000442557 355 ntBASIC3.92□□□□□ -1.78
CDT1Q9H211 RPL21P23-201ENST00000446654 460 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms