Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC007954.1-201ENST00000554198 494 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC006270.2-201ENST00000578523 652 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC090616.2-202ENST00000584248 222 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.06□□□□□ -1.76
USP44Q9H0E7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AL390208.1-201ENST00000605885 644 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC024560.3-201ENST00000608482 349 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 VIS1.1-201ENST00000610517 203 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 AL607023.1-201ENST00000620045 248 ntBASIC4.06□□□□□ -1.76
USP44Q9H0E7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP44Q9H0E7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
USP44Q9H0E7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP44Q9H0E7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP44Q9H0E7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP44Q9H0E7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
USP44Q9H0E7 AC095050.2-201ENST00000510748 1458 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 SNORA31-201ENST00000362607 130 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 RNU6-263P-201ENST00000363811 107 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 RNU6-359P-201ENST00000365466 108 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 MIR184-201ENST00000384962 84 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 RNA5SP31-201ENST00000411144 127 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC093698.1-201ENST00000423843 571 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL593851.1-201ENST00000426171 157 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 BX679664.1-201ENST00000434429 253 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC115115.1-201ENST00000449927 248 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 SNRPGP5-201ENST00000456003 220 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 snoU13.8-201ENST00000458890 104 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC110794.1-201ENST00000505816 425 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 HSPE1P23-201ENST00000509838 286 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC008015.1-201ENST00000555505 465 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 MIR5004-201ENST00000579078 107 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 BBIP1P1-201ENST00000602999 279 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL161756.2-201ENST00000604597 246 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL157817.1-201ENST00000614264 790 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL031667.3-201ENST00000620124 655 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL356585.4-201ENST00000623078 1229 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AC079248.2-201ENST00000623779 326 ntBASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.05□□□□□ -1.76
USP44Q9H0E7 AL022578.1-201ENST00000439330 1433 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 RNU6-723P-201ENST00000383973 107 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 MIR1305-201ENST00000408300 86 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 MIR320C1-201ENST00000408566 88 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 RNU4-47P-201ENST00000410876 114 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AMD1P2-201ENST00000412936 992 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 MTND2P18-201ENST00000419962 1030 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AL590103.1-201ENST00000434488 307 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 MTND4LP10-201ENST00000435146 291 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AL121871.1-201ENST00000443413 436 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 RPL7P52-201ENST00000449200 742 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 MTND1P9-201ENST00000453775 944 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 RPL30P6-201ENST00000475925 342 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC093278.1-201ENST00000494700 600 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP44Q9H0E7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 FTH1P9-201ENST00000513251 355 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 SCARNA20.6-201ENST00000517251 106 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC087276.1-201ENST00000529659 480 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP44Q9H0E7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 MIR5195-201ENST00000583555 115 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 VN1R90P-201ENST00000595717 726 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC112187.2-201ENST00000604345 283 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC018714.1-201ENST00000605028 208 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 HMGN2P28-201ENST00000606102 262 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC078883.4-201ENST00000623218 367 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 AC026422.1-201ENST00000623961 452 ntBASIC4.04□□□□□ -1.76
USP44Q9H0E7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms