Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RPL38P1-201ENST00000460914 211 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL592156.1-201ENST00000508758 304 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC105914.1-201ENST00000511798 226 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC114797.1-201ENST00000514003 728 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AP004371.1-201ENST00000525240 214 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AP003034.1-201ENST00000534621 422 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 HMGB1P33-201ENST00000563485 527 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 XIAPP1-201ENST00000603162 600 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC004825.2-201ENST00000616634 455 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 DDX10P1-201ENST00000448545 1933 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNA5SP388-201ENST00000362584 119 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNU6-1085P-201ENST00000363576 107 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNA5SP447-201ENST00000363749 119 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 U3.11-201ENST00000364476 212 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 SNORD115-47-201ENST00000391226 86 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNA5SP239-201ENST00000410218 129 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNU2-43P-201ENST00000410306 190 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 MTCO2P19-201ENST00000427513 598 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC068287.1-201ENST00000430283 295 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AL451050.1-201ENST00000450126 415 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RPL23AP24-201ENST00000458203 385 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC068305.1-201ENST00000497406 726 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC019235.1-201ENST00000503847 207 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC093824.1-201ENST00000508796 343 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RNA5SP73-201ENST00000516744 108 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 RPL21P12-201ENST00000559810 515 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 SNORA59B-202ENST00000578183 701 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AL136363.1-201ENST00000605349 337 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 MIR6820-201ENST00000611508 62 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 AC093536.2-201ENST00000565257 1406 ntBASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM54Q9BYV2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 AL645937.1-201ENST00000641739 1652 ntBASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 RNU6-1097P-201ENST00000363586 107 ntBASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 RNU6-335P-201ENST00000364563 113 ntBASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 RNU6-169P-201ENST00000365336 107 ntBASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 RNU6-108P-201ENST00000365558 107 ntBASIC4.17□□□□□ -1.74
TRIM54Q9BYV2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms