Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.89
KRTAP3-1Q9BYR8 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TTC41P-205ENST00000551270 3963 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC099654.2-201ENST00000433031 1980 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-1298P-201ENST00000362456 101 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-898P-201ENST00000365627 104 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-356P-201ENST00000384140 107 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 U8.10-201ENST00000384260 133 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR99A-201ENST00000384906 81 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 LDHAP5-201ENST00000394996 622 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 Y_RNA.595-201ENST00000410403 105 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AL359092.1-201ENST00000417156 265 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC007919.1-201ENST00000429380 217 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AL356867.1-201ENST00000429623 299 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 GAPDHP38-201ENST00000503632 1002 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MRPL49P1-201ENST00000505951 535 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 SCARNA5-201ENST00000516201 276 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RNA5SP228-201ENST00000516232 133 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RNA5SP170-201ENST00000517150 101 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AP004607.1-201ENST00000524456 203 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC107016.1-201ENST00000550463 337 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC024614.1-201ENST00000577546 307 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR3189-201ENST00000578735 73 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR5705-201ENST00000579870 89 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR4431-201ENST00000579990 94 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR3145-201ENST00000580727 82 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC090616.3-201ENST00000582184 217 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR5682-201ENST00000584864 76 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC005332.4-201ENST00000592752 579 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 DNAJC19P2-201ENST00000593340 302 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AL162431.4-201ENST00000604674 411 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TUG1_4.1-201ENST00000619464 181 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-1Q9BYR8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms